BO25116.complete Sequence
592 bp assembled on 2010-06-09
GenBank Submission: KX794277
> BO25116.complete
GAAGTTATCAGTCGACATGCTGTCCAGGGTCTTCTGTATGCGCCTGAACA
CCTATGGTGTGGTCATTGGATGGCTGGGCGTGATTCTATCCTTCTTGGCC
ACGATCCTCTTGTCCTTGGCCCTCGGATTCGTCGATGAAATTGCGCAGCA
GATCGCCAAGGGATCGGAAGATTCTAACAAGACGGCCACCGAGATTCGCA
GTGTGCTAATCATCGTTTTCAGTGTTTACCTGGCGCTCAAGGTGATTAAT
CTTCTGGCTTCGGCCATGTTGGTTGCAGGTACCGTTAAGGAACGCCATTT
ACTCCTGCTGCCCTGGCTGATCAACAATGGAGTGCTGCTTGTCTTTGGAA
TTATCACCAATATTGCAATGCTGGCCCAGATCATCGGAAATACATCTTTC
CTGAGCGCTCTTCCAATCATTTTCGTGGATGTTGGCCTGCTCTTGCTGAC
CTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCCAGGCAT
CCCGTGAGATCCAGCGCCCGCTGATCCCACAGCCGACCCAGCAGACCAAC
TCCTATCCCAGCTACACCAAGATTGCAAGCTTTCTAGACCAT
BO25116.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:50:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-RA | 561 | CG15098-PA | 1..558 | 17..574 | 2790 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-RA | 953 | CG15098-RA | 114..671 | 17..574 | 2790 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18834476..18834662 | 203..17 | 935 | 100 | Minus |
| 2R | 25286936 | 2R | 18833965..18834120 | 443..288 | 780 | 100 | Minus |
| 2R | 25286936 | 2R | 18833654..18833784 | 574..444 | 655 | 100 | Minus |
| 2R | 25286936 | 2R | 18834310..18834397 | 290..203 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:50:51 has no hits.
BO25116.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:12 Download gff for
BO25116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 110..667 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:45 Download gff for
BO25116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 114..671 | 17..576 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:17 Download gff for
BO25116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 114..671 | 17..576 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:17 Download gff for
BO25116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18833652..18833784 | 444..576 | 98 | <- | Minus |
| 2R | 18833965..18834118 | 290..443 | 100 | <- | Minus |
| 2R | 18834311..18834396 | 204..289 | 100 | <- | Minus |
| 2R | 18834476..18834662 | 17..203 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:45 Download gff for
BO25116.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14721157..14721289 | 444..576 | 98 | <- | Minus |
| arm_2R | 14721470..14721623 | 290..443 | 100 | <- | Minus |
| arm_2R | 14721816..14721901 | 204..289 | 100 | <- | Minus |
| arm_2R | 14721981..14722167 | 17..203 | 100 | | Minus |
BO25116.pep Sequence
Translation from 16 to 592
> BO25116.pep
MLSRVFCMRLNTYGVVIGWLGVILSFLATILLSLALGFVDEIAQQIAKGS
EDSNKTATEIRSVLIIVFSVYLALKVINLLASAMLVAGTVKERHLLLLPW
LINNGVLLVFGIITNIAMLAQIIGNTSFLSALPIIFVDVGLLLLTWYLYY
GIYSLFKQIQASREIQRPLIPQPTQQTNSYPSYTKIASFLDH
BO25116.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-PA | 186 | CG15098-PA | 1..186 | 1..186 | 917 | 100 | Plus |
| CG13747-PA | 222 | CG13747-PA | 24..183 | 2..160 | 156 | 26.4 | Plus |
