BO25117.complete Sequence
1321 bp assembled on 2010-06-09
GenBank Submission: KX797898
> BO25117.complete
GAAGTTATCAGTCGACATGGCGCTAAATAGTTTACCTATAGTCCTGGCAT
TGGTAGTCTTGGCTCAAGGAGCAAGCTTTGGGCAGGACGAAAGACTGCGC
TATGACAACTACTCGGTTTATAAAGTCAAGTTTGAAACTCAGGCGCAGAG
AAGTATCCTAAGGAAGCTTGCAGAAGATCGAGAAAATTTCAGGTTGTGGC
ATGAAGCCAAGGATGAGTTACACCTGATGCTAAGTCCAGGTGCCTTTGGC
GAACTTGAGACTGAAATTCAGAAAACCAATGTCACTGCAGAGCTGTTCAT
CAGCAATGTGCAGGAACTCATCGATTCGGAGGAAGCTGCCAATCTGAAAG
CCAGCAGAGATGGAACATTTGGTTGGACGAAGTACAATTCTCTGGCCGAA
ATTTATGCTTGGTTGGACGATATACTAGCTGCTTATCCAACGATAACAGA
GAGTTTTATAGTGGGTCAATCGTACGAGGGACGCACCATTCGGGGCATAA
AGATCTCCTATAAGTCGAATAACCCAGGTGTGCTTATTGAGTCCAATATA
CATGCAAGGGAGTGGATCACCTCTGCGACAGCCACTTGGCTGATAAACGA
GTTCCTTACCTCTACGGATGAATTAGTGCGGGATCTTGCGGAGAATCACG
ACTGGTATATAGTGCCAGTGCTGAATGTCGACGGTTTTGTGTACACTCAT
GAAAAGGATCGCATGTGGCGAAAGACCCGTCAACCCTCCGAAATTTCTAG
TTGCATTGGAGCAGACCCCAATCGAAACTACGATTCGCATTGGATGGAGA
ACGAGGGGGCTTCTTCGAATCCCTGTGCTGAGGATTACGGTGGACCCAAG
CCCTTTTCGGAGCCTGAAATCCAGGCCATGTCTGAGTTTGTAATCAGCAT
CAAGGATAAAATCAATGTTTTGCTCGCGTTCCACTCGTATAGTCAGCTTT
TGCTCTCTCCCTATGGACACACTAAAGAGGAGTTTCCTCCCAATTTTGAT
GATATGATGGAAGTTGCTAAGGCCTATGGAGATGCTGTTGAGAGCCTACC
TTATGGAACCGTTTACAGATACGGCTCAGCTGCGGGCATTCTTTATCCCG
CGTCTGGAGCCACCATCGATTGGGCATACAATGAACAAGGAGTGGAGATA
TCGTATACCATTGAATTTAGGGACACCGGTCGATATGGTTTTATCCTGCC
ACCGGTGCACATTATTCCAAACGCAGAGGAGGCACTAATCGGCATTGCTG
CCCTATTAGAAAAGTGTAAAGACCTCGGCTATCTCGGGCTTAAGAGCGCG
CTGGCAAGCTTTCTAGACCAT
BO25117.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7025-RA | 1290 | CG7025-PA | 1..1287 | 17..1303 | 6435 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7025-RA | 1350 | CG7025-RA | 14..1301 | 16..1303 | 6440 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7691869..7692260 | 707..316 | 1960 | 100 | Minus |
| 2L | 23513712 | 2L | 7691426..7691815 | 1094..705 | 1950 | 100 | Minus |
| 2L | 23513712 | 2L | 7691158..7691366 | 1303..1095 | 1045 | 100 | Minus |
| 2L | 23513712 | 2L | 7692499..7692670 | 187..16 | 860 | 100 | Minus |
| 2L | 23513712 | 2L | 7692320..7692447 | 315..188 | 640 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:50:55 has no hits.
BO25117.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:13 Download gff for
BO25117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 8..1294 | 17..1305 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:46 Download gff for
BO25117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 15..1301 | 17..1305 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:18 Download gff for
BO25117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7025-RA | 15..1301 | 17..1305 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:18 Download gff for
BO25117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7691156..7691366 | 1095..1305 | 99 | <- | Minus |
| 2L | 7691426..7691813 | 707..1094 | 100 | <- | Minus |
| 2L | 7691870..7692260 | 316..706 | 100 | <- | Minus |
| 2L | 7692320..7692447 | 188..315 | 100 | <- | Minus |
| 2L | 7692499..7692669 | 17..187 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:46 Download gff for
BO25117.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7692499..7692669 | 17..187 | 100 | | Minus |
| arm_2L | 7691870..7692260 | 316..706 | 100 | <- | Minus |
| arm_2L | 7691156..7691366 | 1095..1305 | 99 | <- | Minus |
| arm_2L | 7691426..7691813 | 707..1094 | 100 | <- | Minus |
| arm_2L | 7692320..7692447 | 188..315 | 100 | <- | Minus |
BO25117.pep Sequence
Translation from 16 to 1321
> BO25117.pep
MALNSLPIVLALVVLAQGASFGQDERLRYDNYSVYKVKFETQAQRSILRK
LAEDRENFRLWHEAKDELHLMLSPGAFGELETEIQKTNVTAELFISNVQE
LIDSEEAANLKASRDGTFGWTKYNSLAEIYAWLDDILAAYPTITESFIVG
QSYEGRTIRGIKISYKSNNPGVLIESNIHAREWITSATATWLINEFLTST
DELVRDLAENHDWYIVPVLNVDGFVYTHEKDRMWRKTRQPSEISSCIGAD
PNRNYDSHWMENEGASSNPCAEDYGGPKPFSEPEIQAMSEFVISIKDKIN
VLLAFHSYSQLLLSPYGHTKEEFPPNFDDMMEVAKAYGDAVESLPYGTVY
RYGSAAGILYPASGATIDWAYNEQGVEISYTIEFRDTGRYGFILPPVHII
PNAEEALIGIAALLEKCKDLGYLGLKSALASFLDH
BO25117.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7025-PA | 429 | CG7025-PA | 1..429 | 1..429 | 2245 | 100 | Plus |
| CG18585-PB | 422 | CG18585-PB | 6..422 | 8..423 | 1303 | 55.4 | Plus |
| CG18585-PA | 422 | CG18585-PA | 6..422 | 8..423 | 1303 | 55.4 | Plus |
| CG14820-PA | 416 | CG14820-PA | 19..416 | 25..423 | 904 | 45.9 | Plus |
| CG17633-PA | 430 | CG17633-PA | 1..428 | 1..422 | 766 | 38.4 | Plus |
