Clone BO25128 Report

Search the DGRC for BO25128

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:251
Well:28
Vector:pDNR-Dual
Associated Gene/Transcriptl(1)G0222-RD
Protein status:BO25128.pep: Imported from assembly
Sequenced Size:3556

Clone Sequence Records

BO25128.complete Sequence

3556 bp assembled on 2012-04-24

GenBank Submission: KX798119

> BO25128.complete
GAAGTTATCAGTCGACATGTCGACCTATTTCGGGGTCTATATCCCGACCT
CCAAAGCGGGCTGTTTTGAGGGATCGGTGTCGCAGTGCATCGGCTCCATA
GCCGCGGTGAACATAAAGCCATCCAATCCGGCGTCTGGATCGGCATCAGT
AGCATCGGGATCGCCATCCGGCTCGGCGGCATCCGTGCAAACGGGCAACG
CAGACGATGGCAGTGCTGCCACCAAGTACGAGGATCCCGACTATCCACCG
GACTCGCCACTGTGGCTGATCTTCACGGAGAAATCCAAGGCGCTGGACAT
CCTGCGACACTACAAGGAGGCGCGCCTCCGCGAGTTTCCCAATCTGGAGC
AGGCGGAGAGTTACGTTCAGTTTGGGTTCGAGAGCATCGAGGCGCTCAAG
AGATTTTGCAAGGCAAAGCCCGAAAGCAAGCCCATTCCGATAATCAGCGG
TAGCGGTTACAAGAGCTCACCGACCTCGACGGACAATTCGTGCTCCTCCT
CGCCGACGGGTAACGGCAGTGGCTTCATCATTCCCCTGGGAAGCAATTCC
TCAATGTCGAATTTACTGCTCAGTGACTCACCGACTTCCTCGCCGAGCAG
CTCCAGCAACGTCATTGCCAATGGGCGACAGCAGCAGATGCAGCAGCAAC
AGCAGCAGCAGCCGCAGCAGCCGGATGTGTCCGGAGAAGGCCCTCCTTTC
CGGGCGCCCACCAAACAGGAACTGGTAGAGTTTCGCAAGCAAATCGAAGG
TGGTCACATAGACCGGGTGAAGAGGATTATATGGGAGAATCCACGATTTT
TGATCAGCAGCGGTGATACGCCCACCAGTTTGAAGGAGGGCTGTCGCTAT
AATGCCATGCACATCTGCGCCCAGGTCAATAAGGCCAGGATCGCTCAGTT
GCTGTTAAAGACCATTTCGGATCGGGAGTTCACTCAGCTTTACGTTGGCA
AGAAGGGCAGTGGCAAGATGTGTGCTGCCCTCAACATCAGTCTCCTGGAC
TATTACCTGAACATGCCGGACAAGGGGCGCGGCGAAACACCGCTCCACTT
TGCCGCAAAGAACGGTCATGTGGCCATGGTCGAGGTTCTCGTTTCCTATC
CGGAGTGCAAATCGCTGCGGAATCATGAGGGCAAGGAGCCCAAGGAAATC
ATCTGCCTGCGTAATGCTAATGCTACACATGTGACCATCAAGAAGCTGGA
GCTGCTCTTGTACGATCCGCATTTTGTGCCCGTACTAAGATCCCAGTCAA
ATACACTGCCGCCAAAAGTGGGTCAACCGTTCTCGCCCAAAGATCCACCG
AACCTGCAACACAAAGCGGACGATTACGAGGGCCTCAGCGTGGACCTGGC
AATCAGTGCGCTGGCGGGACCCATGTCCCGCGAAAAGGCCATGAACTTCT
ATCGCCGTTGGAAGACACCACCGCGGGTCAGCAACAATGTGATGTCGCCG
CTGGCTGGTTCACCATTTAGCTCGCCGGTGAAAGTAACCCCAAGCAAGTC
GATCTTTGACCGAAGTGCTGGAAACTCGAGTCCAGTCCACTCAGGACGCA
GAGTGCTCTTTAGTCCATTGGCGGAGGCGACCAGCTCACCAAAACCGACG
AAAAACGTGCCCAATGGCACCAATGAGTGCGAGCACAACAATAATAATGT
GAAGCCAGTGTATCCGTTGGAGTTCCCGGCGACACCCATTCGAAAAATGA
AACCGGATTTATTCATGGCCTATCGCAATAACAATAGCTTTGATTCGCCA
TCTTTGGCCGATGACTCCCAAATCCTGGACATGAGCCTAAGCCGCAGCCT
GAATGCGTCGCTAAATGACAGCTTCCGTGAGCGGCACATCAAGAACACTG
ATATCGAGAAGGGTCTGGAGGTGGTCGGCCGCCAACTGGCACGACAGGAG
CAGTTAGAGTGGCGCGAGTACTGGGATTTTCTCGATTCATTTTTGGACAT
TGGTACGACCGAAGGCCTGGCCCGTCTTGAAGCGTATTTCCTGGAAAAGA
CCGAACAGCAGGCGGATAAATCAGAAACGGTCTGGAACTTTGCCCATCTG
CATCAGTATTTCGATTCGATGGCCGGCGAGCAACAGCAGCAACTCCGAAA
GGATAAAAATGAGGCTGCGGGAGCAACTTCGCCATCCGCCGGAGTCATGA
CTCCGTACACATGCGTAGAGAAGTCGCTGCAAGTGTTCGCCAAGCGCATC
ACTAAAACGTTGATCAACAAAATCGGCAACATGGTGTCCATCAACGACAC
GCTGCTCTGTGAGCTCAAAAGACTGAAATCGCTGATTGTCAGCTTCAAGG
ATGATGCCCGCTTCATTAGCGTGGACTTTAGCAAGGTGCATTCACGTATC
GCCCACCTGGTGGCCAGCTATGTGACCCACTCGCAGGAGGTCAGCGTAGC
CATGCGTCTACAATTGTTGCAGATGCTCCGAAGTTTGCGGCAACTGCTGG
CCGACGAGCGTGGTCGAGAACAGCATTTGGGCTGCGTATGCGCTAGTCTA
TTGCTGATGCTGGAACAGGCGCCGACATCCGCCGTGCATCTACCAGACAC
TCTGAAGACCGAGGAGCTATGTTGCGCCGCCTGGGAGACGGAGCAGTGTT
GCGCCTGTCTGTGGGACGCAAATCTCAGCCGTAAGACCAGTCGTCGAAAG
CGCACTAAGTCGCTGCGGGCAGCTGCTGTTGTTCAGTCTCAGGGTCAGCT
TCAGGATACTTCGGGATCGACAGGGTCGTCAGCCTTGCACGCTTCGCTTG
GTGTGGGATCGACCAGTTTGGGAGCATCGAGGGTCGTGGCGTCCGCTTCG
AAAGATGCTTGGCGCCGTCAACAAAGCGACGACGAGGACTACGACAGCGA
TGAGCAAGTAATCTTTTTCGACTGCACTAATGTTACGCTGCCTTATGGAA
GCAGCAGCGAGGACGAGGAAAACTTCCGTACGCCGCCGCAAAGCTTGTCG
CCAGGTATTTCCATGGATTTGGAGCCGCGTTACGAGTTGTTTATTTTTGG
AAACGAGCCAACCAAGCGAGATTTGGATGTGCTGAATGCCCTTTCCAATG
TCGACATTGATAAGGAAACACTGCCGCATGTCTACGCCTGGAAGACTGCC
ATGGAGAGCTACTCCTGTGCTGAAATGAATCTCTTCCCATCCCCAAGGAA
CGTCAAGGTTCAAAAGCCGGAGCCTTGGTATTCTGGAACCAGTTCTAGCC
ACAACAGCCAACCATTGTTGCATCCCAAGCGTCTGCTTGCCACGCCAAAG
CTGAATGCCGTGGTCAGCGGCAGACGCGGATCCGGACCATTGACGGCGCC
AGTTACACCGCGTCTGGCGCGAACTCCGTCCGCCGCCAGTATTCAAGTTG
CATCCGAGACGAATGGCGAGTCGGTCGGAACTGCTGTGACTCCGGCATCG
CCGATTTTGAGTTTTGCCGCCTTGACGGCAGCGACGCAGTCATTCCAAAC
ACCATTGAACAAGGTGCGCGGCTTGTTCAGCCAATATCGGGATCAACGGT
CCTATAACGAGGGGGACACGCCGCTGGGCAATCGGAACGCAAGCTTTCTA
GACCAT

BO25128.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:37:38
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0222-RE 3525 CG8465-PE 1..3522 17..3538 17580 99.9 Plus
l(1)G0222-RD 3525 CG8465-PD 1..3522 17..3538 17580 99.9 Plus
l(1)G0222-RG 3510 CG8465-PG 1..3507 17..3538 17320 99.5 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:37:39
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0222-RE 3876 CG8465-RE 155..3676 17..3538 17580 99.9 Plus
l(1)G0222-RD 3870 CG8465-RD 149..3670 17..3538 17580 99.9 Plus
l(1)G0222-RG 3855 CG8465-RG 149..3655 17..3538 17320 99.5 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:37:35
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 17573540..17574540 2300..1300 5005 100 Minus
X 23542271 X 17575050..17575768 1147..429 3595 100 Minus
X 23542271 X 17572909..17573477 2866..2298 2815 99.6 Minus
X 23542271 X 17572054..17572459 3538..3133 2030 100 Minus
X 23542271 X 17578513..17578744 248..17 1160 100 Minus
X 23542271 X 17575843..17576022 428..249 900 100 Minus
X 23542271 X 17574820..17574972 1300..1148 765 100 Minus
X 23542271 X 17572710..17572843 3000..2867 670 100 Minus
X 23542271 X 17572520..17572652 3132..3000 665 100 Minus
Blast to na_te.dros performed on 2014-11-28 04:37:36 has no hits.

BO25128.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:58 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0222-RB 155..3270 17..3132 99 == Plus
l(1)G0222-RB 3271..3661 3148..3540 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 11:43:27 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0222-RE 155..3676 17..3540 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:17 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0222-RD 149..3670 17..3540 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:53:44 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0222-RD 149..3670 17..3540 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:53:44 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
X 17572051..17572459 3133..3540 99 <- Minus
X 17572520..17572651 3001..3132 100 <- Minus
X 17572710..17572843 2867..3000 100 <- Minus
X 17572909..17573475 2300..2866 99 <- Minus
X 17573541..17574539 1301..2299 100 <- Minus
X 17574820..17574972 1148..1300 100 <- Minus
X 17575050..17575768 429..1147 100 <- Minus
X 17575843..17576022 249..428 100 <- Minus
X 17578513..17578744 17..248 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:17 Download gff for BO25128.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 17466084..17466492 3133..3540 99 <- Minus
arm_X 17466553..17466684 3001..3132 100 <- Minus
arm_X 17466743..17466876 2867..3000 100 <- Minus
arm_X 17466942..17467508 2300..2866 99 <- Minus
arm_X 17467574..17468572 1301..2299 100 <- Minus
arm_X 17468853..17469005 1148..1300 100 <- Minus
arm_X 17469083..17469801 429..1147 100 <- Minus
arm_X 17469876..17470055 249..428 100 <- Minus
arm_X 17472546..17472777 17..248 100   Minus

BO25128.pep Sequence

Translation from 16 to 3556

> BO25128.pep
MSTYFGVYIPTSKAGCFEGSVSQCIGSIAAVNIKPSNPASGSASVASGSP
SGSAASVQTGNADDGSAATKYEDPDYPPDSPLWLIFTEKSKALDILRHYK
EARLREFPNLEQAESYVQFGFESIEALKRFCKAKPESKPIPIISGSGYKS
SPTSTDNSCSSSPTGNGSGFIIPLGSNSSMSNLLLSDSPTSSPSSSSNVI
ANGRQQQMQQQQQQQPQQPDVSGEGPPFRAPTKQELVEFRKQIEGGHIDR
VKRIIWENPRFLISSGDTPTSLKEGCRYNAMHICAQVNKARIAQLLLKTI
SDREFTQLYVGKKGSGKMCAALNISLLDYYLNMPDKGRGETPLHFAAKNG
HVAMVEVLVSYPECKSLRNHEGKEPKEIICLRNANATHVTIKKLELLLYD
PHFVPVLRSQSNTLPPKVGQPFSPKDPPNLQHKADDYEGLSVDLAISALA
GPMSREKAMNFYRRWKTPPRVSNNVMSPLAGSPFSSPVKVTPSKSIFDRS
AGNSSPVHSGRRVLFSPLAEATSSPKPTKNVPNGTNECEHNNNNVKPVYP
LEFPATPIRKMKPDLFMAYRNNNSFDSPSLADDSQILDMSLSRSLNASLN
DSFRERHIKNTDIEKGLEVVGRQLARQEQLEWREYWDFLDSFLDIGTTEG
LARLEAYFLEKTEQQADKSETVWNFAHLHQYFDSMAGEQQQQLRKDKNEA
AGATSPSAGVMTPYTCVEKSLQVFAKRITKTLINKIGNMVSINDTLLCEL
KRLKSLIVSFKDDARFISVDFSKVHSRIAHLVASYVTHSQEVSVAMRLQL
LQMLRSLRQLLADERGREQHLGCVCASLLLMLEQAPTSAVHLPDTLKTEE
LCCAAWETEQCCACLWDANLSRKTSRRKRTKSLRAAAVVQSQGQLQDTSG
STGSSALHASLGVGSTSLGASRVVASASKDAWRRQQSDDEDYDSDEQVIF
FDCTNVTLPYGSSSEDEENFRTPPQSLSPGISMDLEPRYELFIFGNEPTK
RDLDVLNALSNVDIDKETLPHVYAWKTAMESYSCAEMNLFPSPRNVKVQK
PEPWYSGTSSSHNSQPLLHPKRLLATPKLNAVVSGRRGSGPLTAPVTPRL
ARTPSAASIQVASETNGESVGTAVTPASPILSFAALTAATQSFQTPLNKV
RGLFSQYRDQRSYNEGDTPLGNRNASFLDH

BO25128.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:06:29
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0222-PE 1174 CG8465-PE 1..1174 1..1174 6081 100 Plus
l(1)G0222-PD 1174 CG8465-PD 1..1174 1..1174 6081 100 Plus
l(1)G0222-PG 1169 CG8465-PG 1..1169 1..1174 6036 99.6 Plus
l(1)G0222-PF 1110 CG8465-PF 11..1110 75..1174 5679 99.7 Plus