BO25141.complete Sequence
580 bp assembled on 2010-06-09
GenBank Submission: KX794983
> BO25141.complete
GAAGTTATCAGTCGACATGCATTTAAATAAATATAGTGAAGTAGTGGAGC
GGCTTGAGAACGAGGAATTTGAGCAAGTCGAACTGGGAGCTGAAGTCTAC
CAGCAATTACTTGCTATTTACCTCTATCAAAACAAACTGGCTGATGCCAA
GTTGTTGTGGATGAGAGTTCCAGCTAACCTAAGGGATGACAAGGAACTGA
TCCAGCTGAACCTGCTCAATATTGCCCTGCAGAACAATAACTATGCCGAT
TTCTTCAAACACATCAAGTATGAGTGGTCGGAAAGAGTAAAGTCACCTGT
GGAGGATCTTCTAAATAAGCAACGCGAAGAGCTGTTCAAACTAATGGGCA
GCGCATATATGTCCATTTACCAGCACAATCTACTGGAATTGTCACTAATG
TCGGAGGACGAACTGAAACACGCCTGTGCGGCCTTAAATTGGACTGAGGA
ACTGGACGGTGACCGGGTAATCCTGAAGCCCAAGGTTCAGGAAGCACCGC
CAGCTCGTGGAAACGATGACCAGTTGCTTAAGTTGACCGAGTTTGTAACC
TTCCTAGAGAATGCAAGCTTTCTAGACCAT
BO25141.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:51:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-RB | 549 | CG42522-PB | 1..546 | 17..562 | 2730 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-RB | 641 | CG13383-RB | 69..614 | 17..562 | 2730 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8365389..8365636 | 315..562 | 1240 | 100 | Plus |
2L | 23513712 | 2L | 8365153..8365328 | 139..314 | 880 | 100 | Plus |
2L | 23513712 | 2L | 8365038..8365105 | 72..139 | 340 | 100 | Plus |
2L | 23513712 | 2L | 8364923..8364979 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:51:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
F-element | 4708 | F-element F 4708bp | 2581..2611 | 116..146 | 119 | 87.1 | Plus |
BO25141.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:26 Download gff for
BO25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 57..602 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:13 Download gff for
BO25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 69..614 | 17..564 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:36 Download gff for
BO25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 69..614 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:36 Download gff for
BO25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8364923..8364979 | 17..73 | 100 | -> | Plus |
2L | 8365040..8365104 | 74..138 | 100 | -> | Plus |
2L | 8365153..8365328 | 139..314 | 100 | -> | Plus |
2L | 8365389..8365636 | 315..564 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:13 Download gff for
BO25141.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8364923..8364979 | 17..73 | 100 | -> | Plus |
arm_2L | 8365040..8365104 | 74..138 | 100 | -> | Plus |
arm_2L | 8365153..8365328 | 139..314 | 100 | -> | Plus |
arm_2L | 8365389..8365636 | 315..564 | 99 | | Plus |
BO25141.pep Sequence
Translation from 16 to 580
> BO25141.pep
MHLNKYSEVVERLENEEFEQVELGAEVYQQLLAIYLYQNKLADAKLLWMR
VPANLRDDKELIQLNLLNIALQNNNYADFFKHIKYEWSERVKSPVEDLLN
KQREELFKLMGSAYMSIYQHNLLELSLMSEDELKHACAALNWTEELDGDR
VILKPKVQEAPPARGNDDQLLKLTEFVTFLENASFLDH
BO25141.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-PB | 182 | CG13383-PB | 1..182 | 1..182 | 937 | 100 | Plus |