BO25144.complete Sequence
415 bp assembled on 2010-06-09
GenBank Submission: KX799871
> BO25144.complete
GAAGTTATCAGTCGACATGTTGAAGGCGATTATCGTTTTTGCCACTATCT
TGGTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAGCGAACC
CATCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCACCACCA
CCAAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGAAACATG
GTGGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGAAAGGCC
AGGCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCAGAAGGA
GCACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGCATTCCA
AGGGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGCCACGCA
AGCTTTCTAGACCAT
BO25144.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:52:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RC | 384 | CG34232-PC | 1..381 | 17..397 | 1905 | 100 | Plus |
CG34232-RA | 384 | CG34232-PA | 1..381 | 17..397 | 1905 | 100 | Plus |
CG34232-RB | 390 | CG34232-PB | 18..387 | 28..397 | 1850 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RC | 775 | CG34232-RC | 178..559 | 16..397 | 1910 | 100 | Plus |
CG34232-RA | 702 | CG34232-RA | 105..486 | 16..397 | 1910 | 100 | Plus |
CG34232-RB | 831 | CG34232-RB | 246..615 | 28..397 | 1850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12165125..12165494 | 397..28 | 1850 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:51:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 295..336 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 295..336 | 111 | 73.8 | Plus |
BO25144.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:28 Download gff for
BO25144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 91..466 | 22..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:15 Download gff for
BO25144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 91..466 | 22..399 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:38 Download gff for
BO25144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 111..486 | 22..399 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:38 Download gff for
BO25144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12165123..12165497 | 22..399 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:15 Download gff for
BO25144.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052628..8053002 | 22..399 | 98 | | Minus |
BO25144.pep Sequence
Translation from 16 to 415
> BO25144.pep
MLKAIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKLQE
VRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQQQ
DNHTRKSRSHSKGSKQHHKRHTGSRRHASFLDH
BO25144.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PC | 127 | CG34232-PC | 1..127 | 1..127 | 696 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 1..127 | 1..127 | 696 | 100 | Plus |
CG34232-PB | 129 | CG34232-PB | 7..129 | 5..127 | 678 | 100 | Plus |