BO25155.complete Sequence
3037 bp assembled on 2010-07-15
GenBank Submission: KX798612
> BO25155.complete
GAAGTTATCAGTCGACATGTCGCCGAATCGATGGATCCTGCTGCTCATCT
TCTACATATCCTACCTGATGTTCGGGGCGGCAATCTATTACCATATTGAG
CACGGCGAGGAGAAGATATCGCGCGCCGAACAGCGCAAGGCGCAAATTGC
AATCAACGAATATCTGCTGGAGGAGCTGGGCGACAAGAATACGACCACAC
AGGATGAGATTCTTCAACGGATCTCGGATTACTGTGACAAACCGGTTACA
TTGCCGCCGACATATGATGATACGCCCTACACGTGGACCTTCTACCATGC
CTTCTTCTTCGCCTTCACCGTTTGCTCCACGGTGGGATATGGCAATATAT
CGCCAACCACCTTCGCCGGACGGATGATCATGATCGCGTATTCGGTGATT
GGCATCCCCGTCAATGGTATCCTCTTTGCCGGCCTCGGCGAATACTTTGG
ACGTACGTTTGAAGCGATCTACAGACGCTACAAAAAGTACAAGATGTCCA
CGGATATGCACTATGTTCCGCCGCAGCTGGGATTGATCACCACGGTGGTG
ATTGCCCTGATTCCGGGAATAGCTCTCTTCCTGCTGCTGCCCTCGTGGGT
GTTCACCTACTTCGAGAACTGGCCCTATTCCATCTCGCTGTACTACAGCT
ATGTGACCACCACAACAATTGGATTCGGTGACTATGTGCCCACATTTGGA
GCCAACCAGCCCAAGGAGTTCGGCGGCTGGTTCGTGGTCTATCAGATCTT
TGTGATCGTGTGGTTCATCTTCTCGCTGGGATATCTTGTGATGATCATGA
CATTTATCACTCGGGGCCTCCAGAGCAAGAAGCTGGCATACCTGGAGCAG
CAGTTGTCCTCCAACCTGAAGGCCACACAGAATCGCATCTGGTCTGGCGT
CACCAAGGATGTGGGCTACCTCCGGCGAATGCTCAACGAGCTGTACATCC
TCAAAGTGAAGCCTGTGTACACCGATGTAGATATCGCCTACACACTGCCA
CGTTCCAATTCGTGTCCGGATCTGAGCATGTACCGCGTGGAGCCGGCTCC
CATTCCCAGCCGGAAGAGGGCATTCTCCGTGTGCGCCGACATGGTTGCCG
CCCAAAGGGAGGCGGGCATGGTACACGCCAATTCCGATACGGAGCTAAGC
AAACTGGATCGCGAGAAGACATTCGAGACGGCGGAGGCGTACCGCCAGAC
CACCGATTTGCTGGCCAAGGTGGTCAACGCACTGGCCACGGTGAAGCCAC
CGCCGGCGGAACAGGAAGATGCGGCTCTCTATGGTGGCTATCATGGCTTC
TCCGACTCCCAGATCCTGGCCAGCGAATGGTCGTTCTCGACGGTCAACGA
GTTCACATCACCGCGACGTCCAAGAGCACGTGCCTGCTCCGATTTCAATC
TGGAGGCACCTCGCTGGCAGAGCGAGAGGCCACTGCGTTCGAGCCACAAC
GAATGGACATGGAGCGGCGACAACCAGCAGATCCAGGAGGCATTCAACCA
GCGCTACAAGGGACAGCAGCGTGCCAACGGAGCAGCCAACTCGACCATGG
TCCATCTGGAGCCGGATGCTTTGGAGGAGCAGCTGAAGAAACAATCACCG
GGTGCCGGTCGCGTCAAGAAGTTCTCCATGCCGGATGGTCTGCGACGTCT
GTTTCCCTTCCAGAAGAAGCGCCCCTCGCAGGATCTGGAGCGCAAGTTGT
CCGTGGTCTCGGTACCCGAGGGTGTCATCTCGCAGCAAGCCAGATCCCCG
CTGGACTACTACAGCAACACGGTCACGGCGGCCTCCAGTCAATCCTATTT
GCGCAACGGACGCGGTCCGCCACCGCCCTTCGAATCGAATGGCAGCTTGG
CCAGCGGCGGCGGCGGGCTAACGAACATGGGCTTCCAGATGGAGGATGGA
GCAACCCCGCCATCGGCATTGGGCGGTGGAGCCTATCAACGCAAGGCGGC
TGCTGGCAAGCGCCGACGCGAGAGCATCTACACCCAGAATCAAGCCCCAT
CCGCTCGCCGGGGCAGCATGTATCCGCCGACCGCGCACGCCTTGGCCCAG
ATGCAGATGCGACGCGGCAGCTTGGCAACCAGTGGCTCTGGATCGGCGGC
CATGGCGGCAGTGGCCGCGCGTCGTGGCAGCCTCTTCCCAGCTACAGCAT
CGGCATCATCGCTGACCTCTGCTCCGCGCCGTAGCAGCATATTCTCGGTT
ACCTCCGAAAAGGATATGAATGTGCTGGAGCAGACGACCATTGCGGATCT
GATTCGTGCGCTCGAGGTAGTGCACACCCATGCCGTGCTTGATGAACAGC
AACAGGCGGCAGCGGCTGGAGGAGCTGCCGGTGGAGGCGGAATATCGAGG
GGTAGCCGCAAACAGCGCAAGATGGGCAATGCTGGACTGGAGCCACCGCA
GCTGCCGCCGATCCTGTCGCTCTTCGCTGGCGATCAAACGAGGACACTGC
AGGCGGCGGCTGCCAATCGGCTGTACGCGCGTCGCTCCACTATTGTTGGC
ATATCGCCCACTGGTGGAGCAGCCACCGCACCGGCAGCCAGATCCCTGCT
GGAACCGCCACCCAGTTACACTGAGAGAGCCGCAAATCAAAGCCAAATAA
CAGCCGGTCCATCGAATGCGCCAACTGTTCAGAGCAAATTCCGTCGTCGC
TTTAGCGTGCGACCGACTGCTCTGCAAATTCCACCGGGACAGGCGCCGCC
ACCAGGTGCCAGTTTGATGGAGCAGTCCTCACAGACGGCGCTCCAGCGAC
GCCTCTCGCTGCGACCCTCGCCACTGGCCCGCGAACTGTCGCCCACGTCG
CCGCCCGGAGGAAGTGGAAGCGCCTTGCCAGCGGGGGCCATCGACGAGTC
TGGCGGAACGTCCGCTCAACGGCTGCTGCCCTTGCCCGCCGGAACGAGAC
CCAGCACCAGCAGCACCCACTCGCCGCTCTCGAGGATCGTGCAGATCTCG
CAAGCACAGCGCAAGAGCAGCATGCCCAGTGCAGCGGCCACGGGATCGAG
TGGTGCCCCCGCCGAGAAGGCAAGCTTTCTAGACCAT
BO25155.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:38:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ork1-RD | 3006 | CG1615-PD | 1..3003 | 17..3019 | 15015 | 100 | Plus |
| Ork1-RA | 3006 | CG1615-PA | 1..3003 | 17..3019 | 15015 | 100 | Plus |
| Ork1-RB | 3006 | CG1615-PB | 1..3003 | 17..3019 | 15015 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:38:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ork1-RD | 4409 | CG1615-RD | 941..3944 | 16..3019 | 15020 | 100 | Plus |
| Ork1-RA | 4100 | CG1615-RA | 632..3635 | 16..3019 | 15020 | 100 | Plus |
| Ork1-RB | 3979 | CG1615-RB | 511..3514 | 16..3019 | 15020 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:38:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10878519..10880578 | 3019..960 | 10300 | 100 | Minus |
| X | 23542271 | X | 10882233..10882532 | 457..158 | 1500 | 100 | Minus |
| X | 23542271 | X | 10881915..10882167 | 709..457 | 1265 | 100 | Minus |
| X | 23542271 | X | 10881475..10881623 | 961..813 | 745 | 100 | Minus |
| X | 23542271 | X | 10885994..10886136 | 158..16 | 715 | 100 | Minus |
| X | 23542271 | X | 10881739..10881845 | 814..708 | 535 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:38:49 has no hits.
BO25155.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:48:08 Download gff for
BO25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ork1-RA | 189..3191 | 17..3021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:02:51 Download gff for
BO25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ork1-RB | 512..3514 | 17..3021 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:33:43 Download gff for
BO25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ork1-RB | 512..3514 | 17..3021 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:33:43 Download gff for
BO25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10882233..10882531 | 159..457 | 100 | <- | Minus |
| X | 10885994..10886135 | 17..158 | 100 | | Minus |
| X | 10881740..10881843 | 710..813 | 100 | <- | Minus |
| X | 10881915..10882166 | 458..709 | 100 | <- | Minus |
| X | 10878517..10880576 | 962..3021 | 99 | <- | Minus |
| X | 10881475..10881622 | 814..961 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:02:51 Download gff for
BO25155.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10772550..10774609 | 962..3021 | 99 | <- | Minus |
| arm_X | 10775508..10775655 | 814..961 | 100 | <- | Minus |
| arm_X | 10775773..10775876 | 710..813 | 100 | <- | Minus |
| arm_X | 10775948..10776199 | 458..709 | 100 | <- | Minus |
| arm_X | 10776266..10776564 | 159..457 | 100 | <- | Minus |
| arm_X | 10780027..10780168 | 17..158 | 100 | | Minus |
BO25155.pep Sequence
Translation from 16 to 3037
> BO25155.pep
MSPNRWILLLIFYISYLMFGAAIYYHIEHGEEKISRAEQRKAQIAINEYL
LEELGDKNTTTQDEILQRISDYCDKPVTLPPTYDDTPYTWTFYHAFFFAF
TVCSTVGYGNISPTTFAGRMIMIAYSVIGIPVNGILFAGLGEYFGRTFEA
IYRRYKKYKMSTDMHYVPPQLGLITTVVIALIPGIALFLLLPSWVFTYFE
NWPYSISLYYSYVTTTTIGFGDYVPTFGANQPKEFGGWFVVYQIFVIVWF
IFSLGYLVMIMTFITRGLQSKKLAYLEQQLSSNLKATQNRIWSGVTKDVG
YLRRMLNELYILKVKPVYTDVDIAYTLPRSNSCPDLSMYRVEPAPIPSRK
RAFSVCADMVAAQREAGMVHANSDTELSKLDREKTFETAEAYRQTTDLLA
KVVNALATVKPPPAEQEDAALYGGYHGFSDSQILASEWSFSTVNEFTSPR
RPRARACSDFNLEAPRWQSERPLRSSHNEWTWSGDNQQIQEAFNQRYKGQ
QRANGAANSTMVHLEPDALEEQLKKQSPGAGRVKKFSMPDGLRRLFPFQK
KRPSQDLERKLSVVSVPEGVISQQARSPLDYYSNTVTAASSQSYLRNGRG
PPPPFESNGSLASGGGGLTNMGFQMEDGATPPSALGGGAYQRKAAAGKRR
RESIYTQNQAPSARRGSMYPPTAHALAQMQMRRGSLATSGSGSAAMAAVA
ARRGSLFPATASASSLTSAPRRSSIFSVTSEKDMNVLEQTTIADLIRALE
VVHTHAVLDEQQQAAAAGGAAGGGGISRGSRKQRKMGNAGLEPPQLPPIL
SLFAGDQTRTLQAAAANRLYARRSTIVGISPTGGAATAPAARSLLEPPPS
YTERAANQSQITAGPSNAPTVQSKFRRRFSVRPTALQIPPGQAPPPGASL
MEQSSQTALQRRLSLRPSPLARELSPTSPPGGSGSALPAGAIDESGGTSA
QRLLPLPAGTRPSTSSTHSPLSRIVQISQAQRKSSMPSAAATGSSGAPAE
KASFLDH
BO25155.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:28:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ork1-PD | 1001 | CG1615-PD | 1..1001 | 1..1001 | 5150 | 100 | Plus |
| Ork1-PA | 1001 | CG1615-PA | 1..1001 | 1..1001 | 5150 | 100 | Plus |
| Ork1-PB | 1001 | CG1615-PB | 1..1001 | 1..1001 | 5150 | 100 | Plus |
| Ork1-PC | 1019 | CG1615-PC | 1..1019 | 1..1001 | 5072 | 97.5 | Plus |
| Task7-PA | 340 | CG9361-PA | 8..256 | 5..272 | 242 | 25.7 | Plus |
