BO25161.complete Sequence
877 bp assembled on 2010-11-18
GenBank Submission: KX799813
> BO25161.complete
GAAGTTATCAGTCGACATGGACATCATGGATATCCAGGCCGTAGAGTCCA
AGCTGAGTGACGTCACGGTGACACCGATACCGCGCAGCCAAGTGCAGAAT
TTCTACAATTACCAGCAGCAGCGGGAGCAGCGCGAGCAGCAGCCCCAAAT
CCAGATATCGGCCATCCACCACTCGCGTGGATCCGTTGGCGGAGGAGGCG
GATCCAACTCATCCAACGCTGCCACCGACTACTCCACGAGCAGCGGTGGC
AAGCGGGAGCGGGACCGCTCCTCCGCCAGCGACTACAGCAGCTCGTCCAG
CAAGCAGAGCTCCGCTGCAGCGGCCAATGCAGCAGCAGCTGCCGCCGCCG
TCGCTGCCCTCCAATACTCCCCGCAGTTCCTCCAGGCCCAGCTGGCGCTA
CTCCAGCAGCAGTCGAACACGACGGCCACGCCGGCAGCCGTCGCCGCTGC
GGCCCTCTCGCTGGCCAACATGTGCTCCAGCAATGGTGGTCAGCGGAATT
CCGGTGCCGGCGTTTCCTCCACCTCCTCTGGCAGCAATGGCCAGAGCATG
GGCCTGAATCTGAGCTCATCGCAGCTAAAGTACCCGCCACCCTCCACCTC
GCCCGTGGTGGTGACCACCCAAACTTCGGCCAATATCACCACGCCGCTGA
CCTCCACGGCCAGCCTGCCCTCAGTGGGCCCGGGCAATGGGCTGACCAAG
TACGCCCAGCTGCTGGCCGTCATTGAGGAGATGGGCCGCGATATCCGGCC
CACGTACACGGGCTCGCGCAGCTCCACGGAGCGTCTCAAGCGGGGCATTG
TCCATGCCCGCATCCTGGTGCGCGAATGCCTCATGGAAACGGAGCGTGCG
GCGCGCCAAGCAAGCTTTCTAGACCAT
BO25161.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:34:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-RB | 888 | CG18292-PB | 1..843 | 17..859 | 4215 | 100 | Plus |
| CG18292-RA | 846 | CG18292-PA | 1..843 | 17..859 | 4215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:34:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-RB | 1831 | CG18292-RB | 198..1041 | 16..859 | 4220 | 100 | Plus |
| CG18292-RA | 1831 | CG18292-RA | 198..1041 | 16..859 | 4220 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:34:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11138056..11138899 | 16..859 | 4220 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:34:29 has no hits.
BO25161.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-11-18 11:32:49 Download gff for
BO25161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 176..1018 | 17..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:33:10 Download gff for
BO25161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 199..1041 | 17..861 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:59 Download gff for
BO25161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 199..1041 | 17..861 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:59 Download gff for
BO25161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11138057..11138899 | 17..861 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:33:10 Download gff for
BO25161.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11032090..11032932 | 17..861 | 99 | | Plus |
BO25161.pep Sequence
Translation from 16 to 877
> BO25161.pep
MDIMDIQAVESKLSDVTVTPIPRSQVQNFYNYQQQREQREQQPQIQISAI
HHSRGSVGGGGGSNSSNAATDYSTSSGGKRERDRSSASDYSSSSSKQSSA
AAANAAAAAAAVAALQYSPQFLQAQLALLQQQSNTTATPAAVAAAALSLA
NMCSSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPPSTSPVVVT
TQTSANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGS
RSSTERLKRGIVHARILVRECLMETERAARQASFLDH
BO25161.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 12:45:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-PA | 281 | CG18292-PA | 1..281 | 1..281 | 1380 | 100 | Plus |
| CG18292-PB | 295 | CG18292-PB | 1..281 | 1..281 | 1380 | 100 | Plus |
| oc-PE | 539 | CG12154-PE | 103..331 | 21..225 | 160 | 27.2 | Plus |
| oc-PD | 542 | CG12154-PD | 106..334 | 21..225 | 160 | 27.2 | Plus |
| oc-PG | 542 | CG12154-PG | 106..334 | 21..225 | 160 | 27.2 | Plus |
