BO25164.complete Sequence
4150 bp assembled on 2010-09-14
GenBank Submission: KX800080
> BO25164.complete
GAAGTTATCAGTCGACATGGAGGCCACTGATCAGGAGGTCATGCTGGAGG
GCAGGGAAGACCTCATGTCCACATCGGCGACATCGTCCACAAATGGCGGG
GACACTAATGGTTGCGGCAAAAAATTGTCCGTAACCTCTCCGGATCCCAC
ACCGTACGTGACCAAGCAGCGAGTGACGCGTCCAACGCCTCCCGCTCCTT
CAAAGAATCCGATGCAATTCGTCCAGATCAAGCCCTGCAACCTCTACCAG
ACCGCGCAGGAGCAGCTGAAGAAGGCCGAGGAGGTCAAGAAGCTGAAGGA
GGTGAAGAAGGAGGAGCCAGAGGAGTGGCAGAACAACCTTGACAATTGGA
AATCATCGAGACGAAAACGTGTCGAACACATCATCGATCGAGCGGTGGAG
ACCAAGAAACTCGAGCTGGAGGAGCATGATCGGTTGCGCCGAAAGTCGAA
AACATTCACCGAAATGATGGAGGAGAGGGCTGAAAGGGGCGGACCTCGGG
GGCGTGCCAAGCTGGCTTCCCTGGCCGTATACAACGAGGATGAGACGAAC
GACCTGAGTGATTTGGGGATCGGAACCAGCAGTGCCAGCGGAAAGAGCAG
CCTGTCCGGGGACTATGACAATAACAGTGTTATGAGCGACCATGCGGCGG
AGCTGGATAAGGCGATTGGAGCAGCTAGCTCTGTAGCTGCTGGAGTAACC
GCCCAAAACGTGGATGAGCAGCTGAATCACATAAACCGCAACGGTAGTAA
TGGGAACCACGGGAACGGAGCGGCTGTTGGCCAGACAGGACCATCAAATT
CCTCCAAGTCAGCAGGGCGGCAATACATCTCCTCGCCAGGATACGATACG
TCCTCCAGTAACGCGCAAGCCAGTTCTCCGGATCTCTGTGAATACACCTA
CGAAGGAGCCATCCAGGACTACAAGCAAAGAGTTCAACGGGCCAGCAGCA
ATGGCAATGGAAATGCCAACGGCAAGTTGATTGGAGAACATATTGCTTAT
CCCACGAGGCGAGGCTCTAAAATTGAGGATCGATTGAGTGGTTTTGAGGT
GACATCGCCAAGCGACACGCAGGAGGGTGTAGAGAAGCAAAAGGTGGACG
TGCCCAAGGTTGACATATCCAAACGCAAGGAGATCTTCGAGCAGGCCAAG
GCGGAAGTCTCAAACGGTGGTGCTCCAGCTGCCCCAAAACTCGTATTTCG
TGATGGTCTTACCAATGGAAATTCAGCTACCACTGCTCCCAAATCGGAGG
TGAGGCGTCTTTCTGGTGACATCTCCAGCATTCGAGATCGCATGCAGAGT
TTGGAACAGCAGCGGAAGGCTTTCAGTTCCAGCAAGAGTGTGGATGTGCC
GGTGCCGCCCCTTAAACAGCGTCTGAATAGTCTGCAGCAGTCCGTTGCCA
AAGAGGAGCAGAAGAAGCCACCGTTGGTGGCGCTCATCGATGCCAGACAA
CTGGAGATCATGAGGGGAGAAGAGGAACGTATGCGCCAGCAGCAACAAAA
AGAGAAGCATTCACCAAGCCAAACTACATTGTGTGCACCTAAGCCAGCTC
CTCCTGCCCTTATTATTGAGGAACCGCCGGTGGCAGACACCAACGACGAC
AGCGGCATTCAGGAGGACACCGCTGATGAACTGCAGCAGCAGCAGCAACT
CAACGCAGCCATCGCCGCCTTGGCGCTCGAGGAGCGCCAGTTGGAGGAAG
CAGCCAATGCGGTCAACCAAATTGAAGCGGAGTTCGATGAGCTGACTGAT
CTGCATCCCTCGCCATTGCCACCATCTCCAGCTCTTCCGGCGGTTCAACA
AAGCCTCCAACAACCGACAGTCGCTCAGGTTCCAGCACAAGCGGTCAATC
AGGCGGCTGCTCCTCCATTGCGGGACATGGAATTTAGTGTAAGTTGTACT
AACAATTTTATCGAACCCGCTAAGATAAGTCCTTGTGATGTTAATGTAGT
AGCTGCTTCAGCGGTGTCGGTGTCCAAATCTGGCCCCACTCCCAATCCCA
CATCCACTCCAAATATGGTATCCTCCTCTCCCAATTGTAACTTGCGTAGA
AAGCCCTCCAATGAAATGGTCCATCATCGCAATTTGCTTAAAATGTTCAA
GGAAACCTTTCAAAACGACGACGATCTGAAAGAGGTCTGCGAGATAGTCA
CTTCGCCTGGTCAGTTTACCCAGATCATTGACTTTTCCAAGCGGCCAAGT
AATCCCCCCATACCAATACCTACTCTACTACCTACCTCTACTCCGATTCC
TACCCAGATACCGCGACCACTGGGCAAGCCGCCCATGTCGCCCAAGGCTG
TGAGGTTAGCGTCCAGTCCTAAGGGACATATAAATCCTTTAAGTTCGCCC
ACGAACTCCGGGTTTTCACCCCCCCAATTCAGTATCAATGGGCGTGTGGA
GATTTTTAATTCACGGCAACTGGACAAGCCGCCCACGCCACCAGCTCCTC
CCAAGAAAACTGTAAGGAGTGAGCATCCTCTTAAGGAAGCGGTTCCTTCA
CCAGAAGTGGTGATGTGCGCTCCTCCTATGACCATCGTTGATCCCGACGA
GCTGCCCAAACCAAATACTGTAAAGGCCCTTTCAAATTGCTTCAGCCAGA
GCGATTCCAAGTCGCTAACATCACCCATAATGTCGCCGAAACCTTTGCCC
AGTGGTCGCATTCCCCAGATCACACCACCTGCTTCTCCAAAGCCCCCGAA
ACGAGTTCAGCTTGACGAGGTGGATCGTAGCTCTGGGGACTATGCCCCAG
TTGTTGGTCAAACCAAGGCAATTGTACACACGCCCCCTAGCAAAATAAAT
GCCCGGGCAAACCAAACTCTTGATCCCCTAGCACCCAACGACTCACTGTG
CCTGCACACATCTTCGCCCAGCGAGATACCTTCCTTGAAAGCCTGCTCCC
CGAATGAATCCAGTTTGTTCAAGCTGGCTTCGTCACGACCCACCTCGCCT
TCAGTGGATGTGGCTTCGTGTCAGAAATTTTTGAATAGAGAAGCACCAAA
GGATATCCAACTGGCCGAAGAAGACCGCAAGAGAATGGATCAGTTTGCTG
TGGAGGAGATGCCCTGTGATAAGATCGATGTGACCAAATCACCCCAGCCC
AATACTGGTTTCCAGATTGTGACCGAGGATCTAGTAAAAAAATGTGATGG
CAAAAACATATCCGAAGCGGTAAGGGATCTAGACGTCCCACCCAGCCAAG
AAGATATTGCCCTGTGTGCGGGACTACTAGACTGTTTGGCTCCAGCTCAG
GAGCCTATTTGTGACAGCATCGATGTGAGGAATGGTCCAGTGCCGGCAAC
TGGATTTCAGGACATCAGTGAGGAGGAGGTGAAAAAGTGTGAAAAGCATA
ATAAAAATTATGTTATCACAAACAGGCCAAGCTCACCCATTGGCAGTGTC
AGAGCAGCTCACTCGAAGGCTTTGATGGACACTTGTGAGCAGATCATTGC
AGAGGAGCGCAAAGCTAGCAGTCAGATGATGAAGACTTCGCTGCCGGAGT
CGGTGGAGAAACCGTCGACACCCCTCCCAGGTCGCAAATCCAAGATTCCC
ATACCCAAGCCTTGCTGTATTTCGGCATCTGGAACTGATTCAATAAGTAG
AGCGGGCTATGTACCAACTGCACCGTCACACCTCTCAGGAAGTGCCCAGC
AGCCGTTAATAGCACGCACCCATGTGGTGGAAACAGAGATCAAGGTCAAG
GAGATCTCCCCACCCAGTATACCTAAGACACCGGAACAAACTCAGCTCCA
TGCATCACCAACTAAGGAGAAGAAAGCCAAGAACATATTTGATTTCCTGC
GCAGAAACTTTGGGCATCAGGAAGAGCCGCAGCATCATTCCACTCTGAAT
GAGACCCTTGAGAAAAAGGTGGTGCTCACCAGCACCAAGAGTGGAGTAGA
TGTGGTCAATGCCGATGAGTTTGTTCGGGTAGACAATTCAAAGTTCTATT
TGGCAAGTGAGCTGGAGGACGTACCAGTGCCACCTCCTCTGCCCAAGACA
CCTGCTCCTGTCAACATTGAGATTCGAAAAAAGATCACTACAAATGAGAT
ATTAGAGGAAAATACAACAGAACAGGCGTTAACCCAGGAAATAAGCGATT
TGCTAGACGACGAGATCATGAAACTGGAGAATGCAAGCTTTCTAGACCAT
BO25164.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 05:24:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43427-RG | 4119 | CG43427-PG | 1..4116 | 17..4132 | 20580 | 100 | Plus |
| CG43427-RF | 4119 | CG43427-PF | 1..4116 | 17..4132 | 20580 | 100 | Plus |
| CG43427-RE | 4119 | CG43427-PE | 1..4116 | 17..4132 | 20580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:24:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43427-RG | 5552 | CG43427-RG | 831..4946 | 17..4132 | 20580 | 100 | Plus |
| CG43427-RF | 5897 | CG43427-RF | 1176..5291 | 17..4132 | 20580 | 100 | Plus |
| CG43427-RE | 5335 | CG43427-RE | 614..4729 | 17..4132 | 20580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 05:24:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 4701157..4704655 | 634..4132 | 17495 | 100 | Plus |
| 3R | 32079331 | 3R | 4698048..4698255 | 127..334 | 1040 | 100 | Plus |
| 3R | 32079331 | 3R | 4700169..4700327 | 476..634 | 795 | 100 | Plus |
| 3R | 32079331 | 3R | 4699717..4699860 | 335..478 | 720 | 100 | Plus |
| 3R | 32079331 | 3R | 4697432..4697542 | 17..127 | 555 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 05:24:41 has no hits.
BO25164.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-16 10:43:59 Download gff for
BO25164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31531-RC | 827..4942 | 17..4134 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:26:23 Download gff for
BO25164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43427-RE | 614..4729 | 17..4134 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 06:10:37 Download gff for
BO25164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43427-RE | 614..4729 | 17..4134 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 06:10:37 Download gff for
BO25164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 4697432..4697542 | 17..127 | 100 | -> | Plus |
| 3R | 4698049..4698255 | 128..334 | 100 | -> | Plus |
| 3R | 4699717..4699859 | 335..477 | 100 | -> | Plus |
| 3R | 4700171..4700327 | 478..634 | 100 | -> | Plus |
| 3R | 4701158..4704655 | 635..4134 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:26:23 Download gff for
BO25164.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 523154..523264 | 17..127 | 100 | -> | Plus |
| arm_3R | 523771..523977 | 128..334 | 100 | -> | Plus |
| arm_3R | 525439..525581 | 335..477 | 100 | -> | Plus |
| arm_3R | 525893..526049 | 478..634 | 100 | -> | Plus |
| arm_3R | 526880..530377 | 635..4134 | 99 | | Plus |
BO25164.pep Sequence
Translation from 16 to 4150
> BO25164.pep
MEATDQEVMLEGREDLMSTSATSSTNGGDTNGCGKKLSVTSPDPTPYVTK
QRVTRPTPPAPSKNPMQFVQIKPCNLYQTAQEQLKKAEEVKKLKEVKKEE
PEEWQNNLDNWKSSRRKRVEHIIDRAVETKKLELEEHDRLRRKSKTFTEM
MEERAERGGPRGRAKLASLAVYNEDETNDLSDLGIGTSSASGKSSLSGDY
DNNSVMSDHAAELDKAIGAASSVAAGVTAQNVDEQLNHINRNGSNGNHGN
GAAVGQTGPSNSSKSAGRQYISSPGYDTSSSNAQASSPDLCEYTYEGAIQ
DYKQRVQRASSNGNGNANGKLIGEHIAYPTRRGSKIEDRLSGFEVTSPSD
TQEGVEKQKVDVPKVDISKRKEIFEQAKAEVSNGGAPAAPKLVFRDGLTN
GNSATTAPKSEVRRLSGDISSIRDRMQSLEQQRKAFSSSKSVDVPVPPLK
QRLNSLQQSVAKEEQKKPPLVALIDARQLEIMRGEEERMRQQQQKEKHSP
SQTTLCAPKPAPPALIIEEPPVADTNDDSGIQEDTADELQQQQQLNAAIA
ALALEERQLEEAANAVNQIEAEFDELTDLHPSPLPPSPALPAVQQSLQQP
TVAQVPAQAVNQAAAPPLRDMEFSVSCTNNFIEPAKISPCDVNVVAASAV
SVSKSGPTPNPTSTPNMVSSSPNCNLRRKPSNEMVHHRNLLKMFKETFQN
DDDLKEVCEIVTSPGQFTQIIDFSKRPSNPPIPIPTLLPTSTPIPTQIPR
PLGKPPMSPKAVRLASSPKGHINPLSSPTNSGFSPPQFSINGRVEIFNSR
QLDKPPTPPAPPKKTVRSEHPLKEAVPSPEVVMCAPPMTIVDPDELPKPN
TVKALSNCFSQSDSKSLTSPIMSPKPLPSGRIPQITPPASPKPPKRVQLD
EVDRSSGDYAPVVGQTKAIVHTPPSKINARANQTLDPLAPNDSLCLHTSS
PSEIPSLKACSPNESSLFKLASSRPTSPSVDVASCQKFLNREAPKDIQLA
EEDRKRMDQFAVEEMPCDKIDVTKSPQPNTGFQIVTEDLVKKCDGKNISE
AVRDLDVPPSQEDIALCAGLLDCLAPAQEPICDSIDVRNGPVPATGFQDI
SEEEVKKCEKHNKNYVITNRPSSPIGSVRAAHSKALMDTCEQIIAEERKA
SSQMMKTSLPESVEKPSTPLPGRKSKIPIPKPCCISASGTDSISRAGYVP
TAPSHLSGSAQQPLIARTHVVETEIKVKEISPPSIPKTPEQTQLHASPTK
EKKAKNIFDFLRRNFGHQEEPQHHSTLNETLEKKVVLTSTKSGVDVVNAD
EFVRVDNSKFYLASELEDVPVPPPLPKTPAPVNIEIRKKITTNEILEENT
TEQALTQEISDLLDDEIMKLENASFLDH
BO25164.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:29:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43427-PG | 1372 | CG43427-PG | 1..1372 | 1..1372 | 7065 | 100 | Plus |
| CG43427-PF | 1372 | CG43427-PF | 1..1372 | 1..1372 | 7065 | 100 | Plus |
| CG43427-PE | 1372 | CG43427-PE | 1..1372 | 1..1372 | 7065 | 100 | Plus |
| CG43427-PH | 1493 | CG43427-PH | 1..626 | 1..626 | 3171 | 99.7 | Plus |
| CG43427-PP | 1501 | CG43427-PP | 1..626 | 1..626 | 3171 | 99.7 | Plus |
