BO25166.complete Sequence
1012 bp assembled on 2010-06-09
GenBank Submission: KX797173
> BO25166.complete
GAAGTTATCAGTCGACATGGCAAACGTGCGCTGTTTATACAAGCTTATTC
GTCTGCAGAAGCTCCTGCTGCCGCTCAATGCGACTAGCTCCCGTTTGGCT
CCACTGCAGCCGAGACCATTGACATTTTTAATAGCAAGGAGTTATGGAAA
GGATGAGAAGAAAGCCAATCTAGAAGACTTTAGAGCCCGCGAGGAGCAGC
GCGAAAGGGAGCGGGATGCGGCCGATCAAGCTGCCGAAAAGGCATCACAA
AAAGAAGCAGGCGGAGGTGGTGGACTGGGTGCAAAAGGATCAGAGTCTAC
AGGCCCAGAAGATGACGCCAAGCAAGCCAAGGTGGATGCCATAAGGGCAA
AGATCCTGGACGCTGCATTGCAGCATGTGCCCCAGCAGGGCTGGACCCGC
CAGGCCATCATTCTGGGTGCCGAGGAAAGTGGCTATCCTAGCGTGGTGCA
CGGCATGTTTCCCGAGGGTGGCTTCGCGCTGGTCTCCCACTTCAACGGCA
AGTGCAACGCCCAGCTGGTGGAAAGCCTGCAGCAAAAGACAGATGGTGGC
AAGCAGGAGGTGGAGGATCCTCTAGATTTTCTGGTACAAGCAGTGCGCCA
GCGTCTGGAGATGGTTACTCCCTACAAGACGCATTGGCCCCAGGCGATGG
CCCTATTAGCCCAGCCCCAGCATGCGCCCACAGCTCTGGCCCAGGTGCTC
ACCCTGGTGGATGACATCTGCTACTACTCCGGAGATCGATCTGTGGATTT
CGGTTGGTACACGAGACGTGTGGGTCTGGCGACCATCATGAAGATGACCG
AGTTGTACTTCCTGCAGGACAAGTCCCCAGGACATGCGCAGACCTGGGAG
TTCCTCAAGAGCCGCATGGACGAGGCTGTGCAACTCCAAATGATGCTATC
CCAAACAGAGGGCATGACGCACACGTTCCAACGCTCCTTTAACTCGGCGT
TCATCACGGCGCGTAATATTCTCGGTCTGGGCTACAATCGTAACGCAAGC
TTTCTAGACCAT
BO25166.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:50:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30493-RB | 981 | CG30493-PB | 1..978 | 17..994 | 4890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:50:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30493-RB | 1577 | CG30493-RB | 75..1052 | 17..994 | 4890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:50:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7701944..7702614 | 78..748 | 3355 | 100 | Plus |
| 2R | 25286936 | 2R | 7702674..7702884 | 749..959 | 1055 | 100 | Plus |
| 2R | 25286936 | 2R | 7699327..7699387 | 17..77 | 305 | 100 | Plus |
| 2R | 25286936 | 2R | 7702940..7702976 | 958..994 | 185 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:50:46 has no hits.
BO25166.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:11 Download gff for
BO25166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30493-RB | 47..1024 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:44 Download gff for
BO25166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30493-RB | 75..1052 | 17..996 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:15 Download gff for
BO25166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30493-RB | 75..1052 | 17..996 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:15 Download gff for
BO25166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7699327..7699387 | 17..77 | 100 | -> | Plus |
| 2R | 7701944..7702614 | 78..748 | 100 | -> | Plus |
| 2R | 7702674..7702883 | 749..958 | 100 | -> | Plus |
| 2R | 7702941..7702976 | 959..996 | 94 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:44 Download gff for
BO25166.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3586832..3586892 | 17..77 | 100 | -> | Plus |
| arm_2R | 3589449..3590119 | 78..748 | 100 | -> | Plus |
| arm_2R | 3590179..3590388 | 749..958 | 100 | -> | Plus |
| arm_2R | 3590446..3590481 | 959..996 | 94 | | Plus |
BO25166.pep Sequence
Translation from 16 to 1012
> BO25166.pep
MANVRCLYKLIRLQKLLLPLNATSSRLAPLQPRPLTFLIARSYGKDEKKA
NLEDFRAREEQRERERDAADQAAEKASQKEAGGGGGLGAKGSESTGPEDD
AKQAKVDAIRAKILDAALQHVPQQGWTRQAIILGAEESGYPSVVHGMFPE
GGFALVSHFNGKCNAQLVESLQQKTDGGKQEVEDPLDFLVQAVRQRLEMV
TPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTR
RVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEAVQLQMMLSQTEGM
THTFQRSFNSAFITARNILGLGYNRNASFLDH
BO25166.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30493-PB | 326 | CG30493-PB | 1..326 | 1..326 | 1683 | 100 | Plus |
