BO25167.complete Sequence
3760 bp assembled on 2010-07-15
GenBank Submission: KX793870
> BO25167.complete
GAAGTTATCAGTCGACATGGACGAGCTGCAGAAGTTGGAGTACCTTTCGC
TGGTCTCGAAGATTTGCACTGAGCTAGACAACCACTTGGGCATCAACGAC
AAGGACCTGGCCGAGTTTATCATCGATTTAGAAAACAAAAATCGCACATA
TGACACATTTCGCAAGGCTTTGCTGGATAATGGCGCCGAATTCCCAGACT
CCCTGGTCCAGAACCTGCAGCGCATCATTAATCTTATGCGCCCCAGCAGA
CCTGGCGGCGCTAGCCAGGAGAAAACTGTCGGCGACAAGAAGGAAGACAA
GAAATCGCAACTTTTGAAAATGTTTCCCGGCCTCGCTTTGCCCAATGACA
CCTACAGCAAAAAGGAGGAGAGCGATGACGATGAGAAGGTGAAGGCGAAA
CCGGAGAAGCATTCCGAAACGCACAAAAAAACCGATATGAGCGATGTGGA
TGCAGCTATGATGGAGCTGGAAGCGCTGGCCCCTGGCGAGGGTGCCACAT
TGGTAAGACCACACAAAGAAGTCAGTTCCAGGGACCGCCACAAGCGCCGA
AGTAGGGATCGAGACACAAAAAGAAGAAGTAGGTCGCGGGAGGATAGGCA
CTCTGATCGCCGCAGAAGCAGATCGCGTGACAAGGAACGCCGTCGTCGCA
GCAGATCCCGAGACAATCGCCGCAGAAGCAGGTCTCGCGAGGATCGCGAT
CGTGACAGAGATCGACGCCACAAGAGTTCCAGCTCAAGAGATCACCACGA
ACGCCGAAGACGAAGCCGATCTCGTTCCACAGAACGGAGAGATAGGAGAG
ATCGTTCGAGGGACTGCAGTGAAAAGATGCCCCCACCATCTGCCGCCATG
ACCGATGATCCGGAGGCGGGCAAGATCTATTCCGGCAAGATAGCTAATAT
TGTACCCTTTGGTTGCTTCGTACAGCTTTTTGGACTGCGGAAACGCTGGG
AAGGCTTAGTACACATCTCACAACTAAGAGCAGAAGGACGCGTGACAGAT
GTAACGGAGGTAGTCACTCGGAATCAGACTGTTAAAGTGAAAGTAATGTC
AATAACTGGTCAAAAAGTGTCCTTGTCGATGAAAGAGGTGGATCAGGACT
CTGGAAAGGATCTTAATCCACTGTCACACGCGCCAGAAGACGATGAGTCT
CTACGAGATCGAAATCCAGATGGCCCCTTTAGCAGCAGCACATCGATGCT
GAATTTGCAAGGCAATGGAATGGAAGGTGACGAGCACGAGTCCAGGAAAC
GTGTGACTAGGATCTCCAGCCCTGAGCGCTGGGAAATCAAGCAAATGATT
AGTTCCGGTGTGTTGGACAGAAGTGAGATGCCTGATTTCGACGAGGAAAC
AGGCTTATTGCCGAAAGACGAAGACGACGAAGCTGATATCGAGATTGAGA
TTGTGGAAGAGGAGCCACCCTTCCTCTCCGGGCATGGTAGAGCCTTACAT
GATCTGTCTCCAGTGAGAATTGTAAAGAATCCCGATGGCTCACTGGCTCA
AGCTGCCATGATGCAGTCGGCTTTGTCTAAGGAGCGTCGCGAGCAGAAGA
TGTTGCAGCGTGAACAAGAGATAGAAGCTATGCCAACGAGCCTCAATAAG
AACTGGATAGACCCACTGCCGGAGGATGAGAGCCGCAGCCTGGCGGCCAA
CATGCGAGGAATGGCTGCTGCTCCTCCTGAAGTTCCAGAATGGAAAAAGC
ATGTCATTGGCGGCAAGAAATCCTCCTTCGGTAAGAAGACTGATCTGACG
CTAGTGGAGCAGCGACAGTCGTTGCCCATATACAAACTGCGAGATGATCT
GATCAAAGCGGTCACGGACAACCAGATCCTTATTGTGATTGGAGAAACTG
GTTCGGGAAAAACCACACAGATCACTCAGTATTTAGGCGAATGTGGATTT
ACTGCTAGAGGAAAGATTGGCTGCACCCAACCCAGAAGAGTGGCTGCCAT
GTCGGTGGCCAAGCGTGTGGCGGAGGAGTACGGTTGCAGGTTAGGCCAGG
AGGTTGGCTACACCATTCGTTTCGAGGATTGCACCAGTCCGGAAACCATA
ATTAAGTACATGACTGACGGTATGTTGCTCCGTGAGTGCCTAATGGAGGC
GGAGCTAAAAAGTTATTCGGTCATTATGTTGGATGAGGCTCACGAACGGA
CAATCCATACTGATGTTCTCTTCGGCCTGCTGAAGACAGCCGTGCAAAAG
CGACCAGAACTGAAGCTAATTGTCACATCAGCCACCTTGGACGCGGTGAA
GTTCTCGCAGTACTTCTTCAAGGCGCCAATCTTCACAATTCCCGGAAGAA
CCTTCCCCGTGGAGGTTTTATATACCAAGGAACCAGAGACGGACTATTTG
GATGCTTCTCTGATTACAGTGATGCAAATCCATTTGCGAGAACCTCCTGG
TGACATTCTGCTCTTCCTTACGGGTCAGGAAGAAATCGACACGGCTTGTG
AAATTTTGTACGAGCGAATGAAGAGTTTGGGACCGGATGTCCCCGAGCTG
ATTATCCTGCCGGTGTACTCCGCGTTGCCATCCGAAATGCAGACCCGTAT
ATTTGATCCTGCGCCCGCTGGCAGCCGAAAGGTTGTTATAGCCACCAATA
TTGCTGAAACTTCACTTACAATCGATGGCATATTCTATGTGGTAGATCCT
GGTTTCGTGAAACAGAAGGTGTACAACTCGAAAACGGGCATGGACTCGCT
GGTGGTCACTCCCATTTCACAAGCGGCAGCAAAGCAAAGAGCGGGAAGAG
CCGGACGTACAGGCCCAGGAAAAACGTACCGTCTCTATACGGAACGTGCG
TATCGAGATGAAATGCTGCCCACGCCGGTGCCAGAAATCCAGCGAACCAA
TTTGGCCACAACAGTACTCCAACTAAAGACAATGGGAATTAACGATCTGC
TGCACTTTGATTTCATGGACGCCCCGCCTGTGGAATCGCTGGTGATGGCG
CTCGAGCAACTACATTCCCTATCAGCATTGGATGACGAAGGCCTGCTTAC
TCGACTGGGCAGACGCATGGCGGAGTTTCCCCTCGAGCCGAATCTATCCA
AGATGCTTATAATGTCCGTCGCTCTGCAGTGTTCCGATGAGATTTTGACT
ATTGTTTCGATGCTCAGTGTGCAGAACGTGTTTTACAGGCCAAAGGACAA
GCAGGCACTGGCGGATCAGAAAAAGGCCAAATTCAATCAAGCGGAAGGTG
ACCATCTGACGCTGCTGGCCGTTTACAACAGTTGGAAGAACAACAAATTC
TCAAATGCCTGGTGCTACGAAAACTTCGTACAGATACGAACTCTAAAACG
CAGCCAGGATGTGAGGAAGCAGCTGCTGGGAATCATGGACAGGCACAAAT
TGGATGTCGTATCCGCTGGAAAAAACTCTGTGCGCATTCAGAAGGCAATC
TGCTCCGGATTCTTCCGCAATGCAGCAAAAAAGGATCCGCAGGAGGGATA
TCGTACCCTGGTCGACTCCCAGGTCGTTTACATTCATCCGTCGAGTGCTC
TCTTCAATCGCCAGCCAGAGTGGGTCATCTATCACGAGCTGGTGCAGACC
ACCAAGGAGTATATGCGTGAAGTAACAACGATCGATCCCAAATGGTTGGT
GGAATTTGCTCCGTCCTTCTTCCGCTTCTCGGACCCCACGAAGCTAAGCA
AATTCAAGAAGAATCAGCGCCTGGAGCCACTGTACAATAAGTACGAGGAG
CCCAATGCCTGGCGTATCTCACGCGTTCGTCGACGTCGCAATGCAAGCTT
TCTAGACCAT
BO25167.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:41:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pea-RA | 3729 | CG8241-PA | 1..3726 | 17..3742 | 18630 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:41:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pea-RA | 3898 | CG8241-RA | 96..3822 | 16..3742 | 18635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:41:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 14153248..14156431 | 16..3199 | 15920 | 100 | Plus |
| 2R | 25286936 | 2R | 14156484..14157030 | 3196..3742 | 2735 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 04:41:44 has no hits.
BO25167.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:48:13 Download gff for
BO25167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 94..3819 | 17..3744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:03:23 Download gff for
BO25167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 97..3822 | 17..3744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:34:54 Download gff for
BO25167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| pea-RA | 97..3822 | 17..3744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:34:54 Download gff for
BO25167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 14153249..14156429 | 17..3197 | 100 | -> | Plus |
| 2R | 14156486..14157030 | 3198..3744 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:03:23 Download gff for
BO25167.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 10040754..10043934 | 17..3197 | 100 | -> | Plus |
| arm_2R | 10043991..10044535 | 3198..3744 | 99 | | Plus |
BO25167.pep Sequence
Translation from 16 to 3760
> BO25167.pep
MDELQKLEYLSLVSKICTELDNHLGINDKDLAEFIIDLENKNRTYDTFRK
ALLDNGAEFPDSLVQNLQRIINLMRPSRPGGASQEKTVGDKKEDKKSQLL
KMFPGLALPNDTYSKKEESDDDEKVKAKPEKHSETHKKTDMSDVDAAMME
LEALAPGEGATLVRPHKEVSSRDRHKRRSRDRDTKRRSRSREDRHSDRRR
SRSRDKERRRRSRSRDNRRRSRSREDRDRDRDRRHKSSSSRDHHERRRRS
RSRSTERRDRRDRSRDCSEKMPPPSAAMTDDPEAGKIYSGKIANIVPFGC
FVQLFGLRKRWEGLVHISQLRAEGRVTDVTEVVTRNQTVKVKVMSITGQK
VSLSMKEVDQDSGKDLNPLSHAPEDDESLRDRNPDGPFSSSTSMLNLQGN
GMEGDEHESRKRVTRISSPERWEIKQMISSGVLDRSEMPDFDEETGLLPK
DEDDEADIEIEIVEEEPPFLSGHGRALHDLSPVRIVKNPDGSLAQAAMMQ
SALSKERREQKMLQREQEIEAMPTSLNKNWIDPLPEDESRSLAANMRGMA
AAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVT
DNQILIVIGETGSGKTTQITQYLGECGFTARGKIGCTQPRRVAAMSVAKR
VAEEYGCRLGQEVGYTIRFEDCTSPETIIKYMTDGMLLRECLMEAELKSY
SVIMLDEAHERTIHTDVLFGLLKTAVQKRPELKLIVTSATLDAVKFSQYF
FKAPIFTIPGRTFPVEVLYTKEPETDYLDASLITVMQIHLREPPGDILLF
LTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAP
AGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPI
SQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTV
LQLKTMGINDLLHFDFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRR
MAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALAD
QKKAKFNQAEGDHLTLLAVYNSWKNNKFSNAWCYENFVQIRTLKRSQDVR
KQLLGIMDRHKLDVVSAGKNSVRIQKAICSGFFRNAAKKDPQEGYRTLVD
SQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPS
FFRFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRNASFLDH
BO25167.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:25:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| pea-PA | 1242 | CG8241-PA | 1..1242 | 1..1242 | 6382 | 100 | Plus |
| l(2)37Cb-PA | 894 | CG10689-PA | 243..871 | 577..1203 | 1987 | 59.5 | Plus |
| l(1)G0007-PA | 1222 | CG32604-PA | 351..1177 | 405..1228 | 1880 | 46.7 | Plus |
| CG11107-PB | 729 | CG11107-PB | 65..721 | 579..1227 | 1709 | 51.7 | Plus |
| CG11107-PA | 729 | CG11107-PA | 65..721 | 579..1227 | 1709 | 51.7 | Plus |
