BO25176.complete Sequence
994 bp assembled on 2010-06-09
GenBank Submission: KX797109
> BO25176.complete
GAAGTTATCAGTCGACATGTCGCTTTTACGCATCAGGAAACCAAAAACCC
GCAAGGGAAAGAAGGTGTTGCTGGCCAGGGAGCCGCAACTCATTGAATCC
GCCCGCACAATGCTGTTTTTGGACGGAAGGAAGTGCGGCGGCAATGTGAA
GCTGTGCATGAAGGACCTGCAGGCGCTGAAGAAGCCGCTGGTTAAAGTGC
TGAACCGCAAAAACGACATTACCCCCTTTGACGATCCCTCATCTCTGGAG
TTCTTGACCATGAAGAACGATGCTGCTTTGTTCACGTTCGGTTCCACGTC
CAAGAAGCGACCCGATAACATTATACTGGGCAGGATCTTCGAGAACGAGG
TGCTGGACATGTTTGAACTGGGCATCAAGCGGTATCAGGCGATTTCCGAG
TTTAAGAACGAGAAAATCGGAGCCTGCGTCAAGCCCTGCCTGGTGTTCAA
TGGTCCGAAATGGGCACAGACCGAGGAACTGAGGCGCCTTCGCAACCTGT
TCATCGACACCTTCCAGCGCGAGAAGGTGGATTCGATCCGGCTGCAGGGC
ATCGAACACGTTCTGAGTTTCACGGTTACCGATGACATGAACATACTGAT
GCGTTCCTACCGGATACTGCTGAAGAAATCTGGCCAGAGGACGCCGCGCA
TAGAGCTTGAAGAGATCGGACCCTCGGCCGACTTCTCCATTCGCCGCACC
AAGATCGCCAGCGAGGATCTGTACAAACAGGCACGCAAACAGCCCAAGCA
GTTGAAGGTGGGCAAGAAGAAGAACATTAGCACAGACGCCCTGGGCAACA
CCAAGGGACGTGTCCATCTGGGCAAGCAGCAAACGGGCTCCATTCAAACG
CGTCGCGTCAAGGCGCTGCGTAAGACGCCGGAGGAGAAGAAGGAGAACCG
ACAGCGCAAGAAGGTTGCTCTGAAGGCGGCCGCCGCCGAAGCACTGGCCT
CACAAGGAAACAATCCCTTCTCTAGTGCAAGCTTTCTAGACCAT
BO25176.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:51:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-RA | 963 | CG7993-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-RA | 1093 | CG7993-RA | 98..1057 | 17..976 | 4800 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18224183..18224906 | 253..976 | 3620 | 100 | Plus |
| 3R | 32079331 | 3R | 18223896..18224114 | 34..252 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:51:04 has no hits.
BO25176.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:16 Download gff for
BO25176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 93..1052 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:51 Download gff for
BO25176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 98..1057 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:20 Download gff for
BO25176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Non3-RA | 98..1057 | 17..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:20 Download gff for
BO25176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18223819..18223838 | 17..36 | 100 | -> | Plus |
| 3R | 18223899..18224114 | 37..252 | 100 | -> | Plus |
| 3R | 18224183..18224906 | 253..978 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:51 Download gff for
BO25176.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14049541..14049560 | 17..36 | 100 | -> | Plus |
| arm_3R | 14049621..14049836 | 37..252 | 100 | -> | Plus |
| arm_3R | 14049905..14050628 | 253..978 | 99 | | Plus |
BO25176.pep Sequence
Translation from 16 to 994
> BO25176.pep
MSLLRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKD
LQALKKPLVKVLNRKNDITPFDDPSSLEFLTMKNDAALFTFGSTSKKRPD
NIILGRIFENEVLDMFELGIKRYQAISEFKNEKIGACVKPCLVFNGPKWA
QTEELRRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVTDDMNILMRSYRI
LLKKSGQRTPRIELEEIGPSADFSIRRTKIASEDLYKQARKQPKQLKVGK
KKNISTDALGNTKGRVHLGKQQTGSIQTRRVKALRKTPEEKKENRQRKKV
ALKAAAAEALASQGNNPFSSASFLDH
BO25176.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-PA | 320 | CG7993-PA | 1..320 | 1..320 | 1614 | 100 | Plus |
