Clone BO25177 Report

Search the DGRC for BO25177

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:251
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG8501-RA
Protein status:BO25177.pep: Imported from assembly
Sequenced Size:490

Clone Sequence Records

BO25177.complete Sequence

490 bp assembled on 2010-06-09

GenBank Submission: KX795169

> BO25177.complete
GAAGTTATCAGTCGACATGGGCAGCGGATCTGAGCTTCCACTACGGATCT
GTATGGTCTGGCTGGTCGCGGGTCTGGCGATTGGCGAGGCACTCCGGTGC
TACGAGTGTGTCGATCAGGAGACGTCGTGCGGATCTGCTGATAATTCGCC
GGGAAGAGTGCGAGAATGCCCGAACTCAACCATGTGCTCGACCACCATGC
TGACCACAATGGTGAATGGAAATGAGTGGATCAGGGTGAGGCGAGGCTGT
GCCAAGCAGGTGGATCATTACTTTGACTATATTGGAAAGCATTGGGAGCA
GAAGTATCGACTGATGGACTTACCGGAGGGCTGCAAGAAGGAGAATGGAA
GGATGAATTGCAACTGTCGCGGAGAACTGTGCAATTCAGGAAGTCATTCG
ACACCAAATTTCCGGTTGCCGTTCGTGCTGATCTTATTGGCCCTGGTCTG
CGGCAAAATCCTTCTTCCCGTCGCAAGCTTTCTAGACCAT

BO25177.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:51:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-RB 459 CG8501-PB 1..456 17..472 2265 99.8 Plus
CG8501-RA 459 CG8501-PA 1..456 17..472 2265 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-RB 629 CG8501-RB 18..474 16..472 2270 99.8 Plus
CG8501-RA 1077 CG8501-RA 466..922 16..472 2270 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12383909..12384365 16..472 2270 99.8 Plus
Blast to na_te.dros performed on 2014-11-28 02:51:09 has no hits.

BO25177.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:17 Download gff for BO25177.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 291..746 17..474 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:53 Download gff for BO25177.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 467..922 17..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:22 Download gff for BO25177.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 467..922 17..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:22 Download gff for BO25177.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12383910..12384365 17..474 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:53 Download gff for BO25177.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8271415..8271870 17..474 99   Plus

BO25177.pep Sequence

Translation from 16 to 490

> BO25177.pep
MGSGSELPLRICMVWLVAGLAIGEALRCYECVDQETSCGSADNSPGRVRE
CPNSTMCSTTMLTTMVNGNEWIRVRRGCAKQVDHYFDYIGKHWEQKYRLM
DLPEGCKKENGRMNCNCRGELCNSGSHSTPNFRLPFVLILLALVCGKILL
PVASFLDH

BO25177.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-PB 152 CG8501-PB 1..152 1..152 840 100 Plus
CG8501-PA 152 CG8501-PA 1..152 1..152 840 100 Plus