BO25179.complete Sequence
1171 bp assembled on 2010-06-09
GenBank Submission: KX799819
> BO25179.complete
GAAGTTATCAGTCGACATGAACAAGGACAACTCCAGCATGAAAATGGATC
CGCAGCTAGCCCTACGCCTCCTGGCTGATGGCGGAGTGCTGGTCATCGCC
GGTGTACCCGAGGGCACGGAATTCGGCATTGATCTTTGTGCCTACACCAT
TGGTCCGGATTTCCGAGGCGTCAAGATGATTCCACCCGGAGTCCACTACG
TATGGTGCTCCTCCCGTGGTCCCTACGGCGATGCAGCCCCTCGTGTTGGA
TTCGTGCACTTCTTCCATCCGAATGAGATTGTCGTACGAGAGTGGGACCA
CGAACTGGAGGAACTGCGCCCGCGGAGGATTGCCGAACCGGAAGTAGAGC
GAGACCGAATCCGCAAAAACCTAGCCCAACTGGAGCGCGTGCTGGCGCCG
TACGACTATCGTTACGTGGTCCAGTGGAAGGAACTCACCGGCAGCGTGAC
GGAGTCTTGCGTGGATCGCTGCCGTCCGACAGAAGGAACCATCCGTACGA
ACATCGAACTGCAATCCTGCCCGGACGCAGATCGGCCGCGAGGTGGAGCC
GCTACTGTCAGCATAAGCCGCCGGAATGCTGCAGCTCGGATTCTCTTAGA
TGAGAGCGAACTCCTACCGGACCTTAAGCCCGTGGAAGGAACAGCTCCGC
GCTTCACTACCGTACCCCTGCGTGTTCCACAAGATGCCCTGCCCGCTGAT
GTTTCCCGCCATGCCTTGGACTGCATCGATGCTGTTGACAAACTGCTCGA
AGGCTTTGAAACGGCCGATGGACTCATTGAGGAACTGCAGCTGGCTTACG
CATTTTTCCTAGTGGGCTACTCTGTGGAGTCTCTGGCCCACTGGCGCAAG
CTTTTGGGCTTGCTGGCTCACTCGCAAACGGCGGTCACCAAGCACAAGTT
AACGTACATGAAATACAGCGAGGTTTTGGCCCACCAGCTGCCCCATCTGC
CCGAGGAGCTGATGGTGCCTGGTCCGCATAACACCGTCTACAAAGATGTA
CGCGAGCTGCTGGTCAATCTGCATGCGGGCGGCTTAAGTGTCAGCGCTGA
GCGGCTAACTAAGCGGCTGGAGAAAAAATTGGGATGGGAATTCGAGGGCC
TGCTAGACGAGGATCCCGAGGACCAGCCTGTAGTCATCGAACTTCCGGAG
GCCGCAAGCTTTCTAGACCAT
BO25179.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:51:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12320-RB | 1140 | CG12320-PB | 1..1137 | 17..1153 | 5610 | 99.6 | Plus |
| CG12320-RA | 1140 | CG12320-PA | 1..1137 | 17..1153 | 5610 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12320-RB | 1666 | CG12320-RB | 36..1172 | 17..1153 | 5610 | 99.6 | Plus |
| CG12320-RA | 1237 | CG12320-RA | 36..1172 | 17..1153 | 5610 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18251563..18252699 | 1153..17 | 5610 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:51:20 has no hits.
BO25179.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:19 Download gff for
BO25179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 30..1166 | 17..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:28:57 Download gff for
BO25179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 30..1166 | 17..1155 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:24 Download gff for
BO25179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12320-RA | 36..1172 | 17..1155 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:24 Download gff for
BO25179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18251561..18252699 | 17..1155 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:28:57 Download gff for
BO25179.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14077283..14078421 | 17..1155 | 99 | | Minus |
BO25179.pep Sequence
Translation from 16 to 1171
> BO25179.pep
MNKDNSSMKMDPQLALRLLADGGVLVIAGVPEGTEFGIDLCAYTIGPDFR
GVKMIPPGVHYVWCSSRGPYGDAAPRVGFVHFFHPNEIVVREWDHELEEL
RPRRIAEPEVERDRIRKNLAQLERVLAPYDYRYVVQWKELTGSVTESCVD
RCRPTEGTIRTNIELQSCPDADRPRGGAATVSISRRNAAARILLDESELL
PDLKPVEGTAPRFTTVPLRVPQDALPADVSRHALDCIDAVDKLLEGFETA
DGLIEELQLAYAFFLVGYSVESLAHWRKLLGLLAHSQTAVTKHKLTYMKY
SEVLAHQLPHLPEELMVPGPHNTVYKDVRELLVNLHAGGLSVSAERLTKR
LEKKLGWEFEGLLDEDPEDQPVVIELPEAASFLDH
BO25179.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12320-PB | 379 | CG12320-PB | 1..379 | 1..379 | 1987 | 100 | Plus |
| CG12320-PA | 379 | CG12320-PA | 1..379 | 1..379 | 1987 | 100 | Plus |
