Clone BO25190 Report

Search the DGRC for BO25190

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:251
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG9624-RA
Protein status:BO25190.pep: Imported from assembly
Sequenced Size:902

Clone Sequence Records

BO25190.complete Sequence

902 bp assembled on 2010-06-09

> BO25190.complete
GAAGTTATCAGTCGACATGAATACCTCCGAAGTCAAACGAACGCTGGGTA
GCCCCTTCTTCGACGTGCTATGGCCATTGATCCTGGACGAGAATGTCTGT
CGCATCGAGACCAAGCCGGACGAATTCTTTGTGCCCCGGCAGCCCTTCAA
TCGACTGGATTGGCATATCTATCTGTCCCAGGTGGGCTTTCCTTTCTACA
TGCCGCCACATGAGCTGCGCTGCTGCAAAGGAGCCCAAAGGGAGGAGATC
GAGAACGAGGATGCTGAGAATGCCTTAAACCAGGAGGTGGAGGAGCGAAC
GGCGTCGAATCAGGTGGACTTTCTGCGCCATGGATCCCGGGACATTAGAC
CCATAGATGAGGTGGTAAACAAACTGAGGATGGAGCAGGAGCGTCGCCAG
AAGTTGGCGTACGACTTTGCCAATCGGCGCTATCCTTGGACCATGCAAAC
TCCCAGTCACGAACTGGGCTTCACCATCACTGAGGAGCTGCAGAAGTGCT
TCAAGGGACCCATGGAGCTGGACATCTTGAGGGCCATTCATGATCACGAC
TGCAAGCTAATGATTATCGATCTGGGCACTGATGTGGACATTAAGGACTG
CCAGCGCTGGATAAAGTTTCGTCCATATATTCAGTTACTGGCATTGCCCC
GAACACCTCGCATGGAACGATCGCTTCAGGTGCTCAATGTCTTCCACACG
TATTTGGTGGAAGAATCGGCTGATAACTCATGGCACGATGAGGTGCAATA
CTCCCTTCGCACAGCTTTTGTGCACGCACAGAAAAATCAGCTCCTTAAGT
CCTGCGGAGAGCCATTTGTCTTCGTATTTAGTCGTTTTCGTGGCATCTGC
ACCTGCGATACCTATAAGATAATCCGACGGGCATGCAAGCTTTCTAGACC
AT

BO25190.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:51:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-RA 870 CG9624-PA 1..868 17..884 4325 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:51:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-RA 1049 CG9624-RA 77..944 17..884 4325 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:51:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14228202..14229069 884..17 4325 99.9 Minus
Blast to na_te.dros performed on 2014-11-28 02:51:45 has no hits.

BO25190.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:24 Download gff for BO25190.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 92..961 17..885 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:08 Download gff for BO25190.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 92..959 17..886 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:33 Download gff for BO25190.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 77..944 17..886 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:33 Download gff for BO25190.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14228199..14229069 17..886 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:08 Download gff for BO25190.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10053921..10054791 17..886 99   Minus

BO25190.pep Sequence

Translation from 16 to 901

> BO25190.pep
MNTSEVKRTLGSPFFDVLWPLILDENVCRIETKPDEFFVPRQPFNRLDWH
IYLSQVGFPFYMPPHELRCCKGAQREEIENEDAENALNQEVEERTASNQV
DFLRHGSRDIRPIDEVVNKLRMEQERRQKLAYDFANRRYPWTMQTPSHEL
GFTITEELQKCFKGPMELDILRAIHDHDCKLMIIDLGTDVDIKDCQRWIK
FRPYIQLLALPRTPRMERSLQVLNVFHTYLVEESADNSWHDEVQYSLRTA
FVHAQKNQLLKSCGEPFVFVFSRFRGICTCDTYKIIRRACKLSRP

BO25190.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-PA 289 CG9624-PA 1..289 1..289 1560 100 Plus