BO25213.complete Sequence
265 bp assembled on 2010-06-09
GenBank Submission: KX798577
> BO25213.complete
GAAGTTATCAGTCGACATGAAAGTACTCCTGGCTTTAACTTTCCTGGCCA
CTTTGGCTCTTTCAGTGGCCCTTCCCCAGGTGGGACATGGATCTGTAAAT
GGACCCAGTGGGCGCTTCCCTATGACGAAGAATTGGGCGCAACCTCCGGT
TGATTTGCGAAAACCCATTATCTTTCTGCCAGAGGCCACGCCCATTCACG
AAGCCCAGGAGTCGCGCCCCCGACTAGCCAAACATCGCAAGAGTGGAGCA
AGCTTTCTAGACCAT
BO25213.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:52:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34193-RB | 234 | CG34193-PB | 1..231 | 17..247 | 1155 | 100 | Plus |
CG34193-RA | 234 | CG34193-PA | 1..231 | 17..247 | 1155 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:52:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34193-RB | 2333 | CG34193-RB | 989..1219 | 17..247 | 1155 | 100 | Plus |
CG34193-RA | 806 | CG34193-RA | 58..288 | 17..247 | 1155 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17510145..17510280 | 112..247 | 680 | 100 | Plus |
2R | 25286936 | 2R | 17509983..17510078 | 17..112 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:52:28 has no hits.
BO25213.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:36 Download gff for
BO25213.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34193-RA | 34..264 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:24 Download gff for
BO25213.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34193-RA | 40..270 | 17..249 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:49 Download gff for
BO25213.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34193-RA | 58..288 | 17..249 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:49 Download gff for
BO25213.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17509983..17510078 | 17..112 | 100 | -> | Plus |
2R | 17510146..17510280 | 113..249 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:24 Download gff for
BO25213.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13397488..13397583 | 17..112 | 100 | -> | Plus |
arm_2R | 13397651..13397785 | 113..249 | 98 | | Plus |
BO25213.pep Sequence
Translation from 16 to 265
> BO25213.pep
MKVLLALTFLATLALSVALPQVGHGSVNGPSGRFPMTKNWAQPPVDLRKP
IIFLPEATPIHEAQESRPRLAKHRKSGASFLDH
BO25213.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34193-PB | 77 | CG34193-PB | 1..77 | 1..77 | 398 | 100 | Plus |
CG34193-PA | 77 | CG34193-PA | 1..77 | 1..77 | 398 | 100 | Plus |