BO25236.complete Sequence
1624 bp assembled on 2010-06-11
GenBank Submission: KX797638
> BO25236.complete
GAAGTTATCAGTCGACATGATAGCAGAATTCCCACGGCCGACGACGAATG
TGAATTGGGAAAATCGAAAAAGCAGGCAAAGCCAGGAGGCGGATAAATCG
CCGAGCGAGTGCAGCAAATCGATCAGCTGTGACGTCGACGGGGGCAGAAA
GTTTGGCCAAAAGAAAAGGTCAAACAAGCAGCAGCAGCAACAACAACAAC
AACTGCACGCGGAACGGAAAGAGGAGGAGCTCTGTCACAAGCAAGGGGTA
AAGGATAAGAGTAGTAAGAAGAAGGAGAATCTAGCAGGCGAGGAGGATAA
GAAGAAAAAGCAAGAGGAAAGGGAACATAGCAAGAAGAAGCAGCAGCTTC
AGCAGAAGCAAAGGGCAAATAACAAGAAGAAGAAGCGGCATCAGCCTCCC
CGTGTACAGAGGAAAAAAAACCTCGTCTTATTTTTAGATTATTTACGCCA
GTTTGGTGCCGTCGAAAGCGAAATTGTCGCTGTTGAATCAGCCGGCTGCT
GTGACGTCAGAGAAGCAGGCTGCCATCACGCCAACGGTAAATACGCCGCC
CATAACGGCACTTGGAGCCATTTCGAGCATAAAACCGAAATTTATGCTCT
ATATCGTCACCTGGAGATCGGTGGCCCGCTCGAACAAGTGCAACAGCAAC
AGCAGCTGAGGGTCTGTCCAATCAAGACCCGGCTGCGCTTCGAGATGCTC
TTTGCCGAGCCACCGCCCACCCAGGGCCACGCCCCCACCGCCCACGGTCA
CGATCATACGGCCGATGATATGCCAGATGCGCCACCTGGTGGCGAGCCGG
TGATCCCAATGCTGCAGGATCAGCAAAACAGCGAACTTATGGCCGGCACC
GCCAGCAACGTCGAGCTAATGGAGGCCATGAAGAAATTGGACGCGGACCT
GGTGGCCCTTTTCGCCACTGCTGCCTCCGCCGAACCTCTTAAGATTAGGA
AACAGCAGGAGGTCCTGTGGCCGGGAGCCGAGCCGGAGCAAACCGCGCAG
GAATCGGAGGATGATGAGCTGGTGATGACGCCGGAGCTCTTCCGCAGCTG
CAACGCCTTGCAGCTGCACTTGGAGGCACTGACATTGCAGCCGGAGGGAA
CCCAACGCATGGAACTGGTTCAGAACGAAGTGCGACCCATTTTCACCGTG
GAGTGCCAGCTGTCGGGGGACTTGATCCGTAAAGTGCCGCGCCAACCGAT
GTTCCACATCATGCAGTTCGAGTCGGAGAAGTTCCAGAGCCTGACGCAGT
GCACCCGTTTCGGGCAGACGGCTCAGCGTCAGGTCGATATGGAAGATAAG
AGCCTGCAGGATCCGGAACAGAGTGCTGGCCATGTAGACATCACGGTTTG
GTGGCGCGAACCCGGCACCTGTCTCAACGAAATGCTCGGCATGGGCCGCC
TGGAGCTCAGGGAGCTCTACAGGGCATCCCTGTTGGAGCAGTGCAAGTGC
ATTGCCATTCGGCGACGCGACGTCCACCTGGGTAGCGTGTACTTGAAGAT
CAGTCTGCTTCAGAATTTGAATGGTAGCCCGGAGCAGCCGCAGCAACAGC
AGCAGCAGCCGGGCCAAAAGAACGAAAGTGGAAACAAGGCAGCAGGTGAA
TATATAGCAAGCTTTCTAGACCAT
BO25236.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-RF | 1593 | CG32425-PF | 1..1590 | 17..1606 | 7920 | 99.9 | Plus |
| CG32425-RB | 741 | CG32425-PB | 1..738 | 869..1606 | 3675 | 99.9 | Plus |
| CG32425-RA | 2280 | CG32425-PA | 1..727 | 869..1595 | 3620 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:03:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-RF | 2171 | CG32425-RF | 314..1903 | 17..1606 | 7920 | 99.9 | Plus |
| CG32425-RB | 1090 | CG32425-RB | 58..822 | 842..1606 | 3795 | 99.7 | Plus |
| CG32425-RA | 2813 | CG32425-RA | 90..839 | 846..1595 | 3735 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:03:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20497636..20498465 | 17..846 | 4135 | 99.9 | Plus |
| 3L | 28110227 | 3L | 20510029..20510790 | 845..1606 | 3795 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:03:13 has no hits.
BO25236.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-11 17:54:25 Download gff for
BO25236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 232..1821 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:43:27 Download gff for
BO25236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 314..1903 | 17..1608 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:17:17 Download gff for
BO25236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32425-RF | 314..1903 | 17..1608 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:17:17 Download gff for
BO25236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20497636..20498464 | 17..845 | 99 | -> | Plus |
| 3L | 20510030..20510790 | 846..1608 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:43:27 Download gff for
BO25236.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20490736..20491564 | 17..845 | 99 | -> | Plus |
| arm_3L | 20503130..20503890 | 846..1608 | 99 | | Plus |
BO25236.pep Sequence
Translation from 16 to 1624
> BO25236.pep
MIAEFPRPTTNVNWENRKSRQSQEADKSPSECSKSISCDVDGGRKFGQKK
RSNKQQQQQQQQLHAERKEEELCHKQGVKDKSSKKKENLAGEEDKKKKQE
EREHSKKKQQLQQKQRANNKKKKRHQPPRVQRKKNLVLFLDYLRQFGAVE
SEIVAVESAGCCDVREAGCHHANGKYAAHNGTWSHFEHKTEIYALYRHLE
IGGPLEQVQQQQQLRVCPIKTRLRFEMLFAEPPPTQGHAPTAHGHDHTAD
DMPDAPPGGEPVIPMLQDQQNSELMAGTASNVELMEAMKKLDADLVALFA
TAASAEPLKIRKQQEVLWPGAEPEQTAQESEDDELVMTPELFRSCNALQL
HLEALTLQPEGTQRMELVQNEVRPIFTVECQLSGDLIRKVPRQPMFHIMQ
FESEKFQSLTQCTRFGQTAQRQVDMEDKSLQDPEQSAGHVDITVWWREPG
TCLNEMLGMGRLELRELYRASLLEQCKCIAIRRRDVHLGSVYLKISLLQN
LNGSPEQPQQQQQQPGQKNESGNKAAGEYIASFLDH
BO25236.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:21:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32425-PF | 530 | CG32425-PF | 1..530 | 1..530 | 2790 | 100 | Plus |
| CG32425-PB | 246 | CG32425-PB | 1..246 | 285..530 | 1273 | 100 | Plus |
| CG32425-PA | 759 | CG32425-PA | 1..242 | 285..526 | 1251 | 100 | Plus |
| CG32425-PE | 759 | CG32425-PE | 1..242 | 285..526 | 1251 | 100 | Plus |
