BO25251.complete Sequence
433 bp assembled on 2012-04-24
GenBank Submission: KX799101
> BO25251.complete
GAAGTTATCAGTCGACATGTCTGCACCGCTAGAGAACCTTGAGACCCAGC
TAGAGATGTTCATCGAGAATGTTCGTCAGATCCGCATAATCGTAAGCGAT
TTTCAGCCACAGGGTCAAAATGTACTCAACCAGAAAATTAACAGCTTGGT
GACCGGCCTACAAGAGATCGACAAGCTGCGCTCCCAGGTGCAGGACGTCT
ATGTGCCATTTGAAGTGTTTTTTGACTACATCGACCAAGACAAGAATCCT
CAGCTGTACACCAAGGATTGCGTGGAGAAGGCACTGGCCAAGAACGAGGA
GGTCAAGGGCAAGATCGAGGGCCTGAAGAAGTTCAAAACGAATCTGCTGC
TGGAGCTGTATAAAACATTTCCCAATGAGATGAACAACTACCGCGCTTAT
CGCAAGGACTCCATGGCAAGCTTTCTAGACCAT
BO25251.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:49:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-RB | 402 | CG5057-PB | 1..399 | 17..415 | 1995 | 100 | Plus |
MED10-RC | 402 | CG5057-PC | 1..399 | 17..415 | 1995 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:49:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-RB | 597 | CG5057-RB | 119..517 | 17..415 | 1995 | 100 | Plus |
MED10-RC | 638 | CG5057-RC | 119..517 | 17..415 | 1995 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:49:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16232380..16232656 | 139..415 | 1385 | 100 | Plus |
3L | 28110227 | 3L | 16232202..16232323 | 17..138 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 07:49:45 has no hits.
BO25251.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:33 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RA | 174..566 | 17..417 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:46 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RB | 174..572 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:30 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RC | 119..517 | 17..417 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:04:45 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RC | 119..517 | 17..417 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:04:45 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16232202..16232323 | 17..138 | 100 | -> | Plus |
3L | 16232380..16232656 | 139..417 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:30 Download gff for
BO25251.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16225302..16225423 | 17..138 | 100 | -> | Plus |
arm_3L | 16225480..16225756 | 139..417 | 99 | | Plus |
BO25251.pep Sequence
Translation from 16 to 433
> BO25251.pep
MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQKINSLVTGLQE
IDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKI
EGLKKFKTNLLLELYKTFPNEMNNYRAYRKDSMASFLDH
BO25251.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:11:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-PB | 133 | CG5057-PB | 1..133 | 1..133 | 680 | 100 | Plus |
MED10-PC | 133 | CG5057-PC | 1..133 | 1..133 | 680 | 100 | Plus |