BO25254.complete Sequence
1021 bp assembled on 2010-06-09
GenBank Submission: KX795319
> BO25254.complete
GAAGTTATCAGTCGACATGGGTTCATGCCTTGGCAGCTGTGCCACAGCTG
CCGCCGCACCAGCCCACTCCGCCTGCACCTCAACGTCCGACTCCACCACC
CACTCGACTTCCTCGACGTCGTCTTCACTGACAACTCCCCCCACGTCCTG
GGTGGCCAACAGCTGGCTCTGGCGAAAGAACAGATCTGCAGGAAGACAAG
ATCCAGAGGCAGATCTCTTATCGAGGACCACCAGGCAGCGCTGCCAACGG
AACGGATTCATCTACCGCATCCTGCGGCTCAAGAAAAGGCAGCAGTGTCC
CAGCTTCCTGGACAAGTACTGGGAGCAGCAGCCCAGCTACGCCAAGCTGC
CGACCACCGCCATGGCGGACATTCAAATGCAGAACCTGGACGCCGGCAAG
TTGCTCAACGCCCAGACCACGCCCAGTCGGGAGACGGAGATGGGACTTGG
AGCCTACCAGCGCATGGCCAACTCGCGGGCCAGCTCCTCCTTGGATCTCG
AGTGGGAACACGAGTACTCACAGCTGCGGCAGTATCAGTACCAGTGCCAG
CAGGTGCCCAAGGAGCTGCCACCAACGCCACCAAAGCCGCGCTACGCATC
CTTAGACCAGCTGGCGGCAGCCAATGCGATGGCCACCAGCCAAGGACGAC
ACATGGCGCGCCAAGCCAGACTGAGTTGCCAGCGCCACGGAGGTTCGCTC
ACGCGGAACTCGTGCTGTTCGTCTACGCAAAACTCCTGGTCGCACATATC
CACGCCAGAGTCGCTGGAATGGGACGTGGACGAGGAGCGAGAGCAGCAGC
GTCAGCTTCGTCTGGAGGATGACAATCTGGATGATAGAACGCTCAAGTTG
CTGCATCAGATCGAGCAATTGAAGCACCATGTACTGCAGGAGACTGGCGA
TGGACTCAGCATGGAATCAGCTGCGGTCGAGGAGCTCACCGAGGGCCTTC
AGTTCCGGGCAACGCACTTCGCTGGCGACTCCCAGCTGGAGGCCCATGTA
AGTGCAAGCTTTCTAGACCAT
BO25254.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:53:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13982-RB | 990 | CG13982-PB | 1..987 | 17..1003 | 4935 | 100 | Plus |
| CG13982-RA | 990 | CG13982-PA | 1..987 | 17..1003 | 4935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:53:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13982-RB | 1726 | CG13982-RB | 389..1376 | 16..1003 | 4940 | 100 | Plus |
| CG13982-RA | 2643 | CG13982-RA | 389..1376 | 16..1003 | 4940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:52:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6413423..6414068 | 358..1003 | 3230 | 100 | Plus |
| 2L | 23513712 | 2L | 6413180..6413366 | 171..357 | 935 | 100 | Plus |
| 2L | 23513712 | 2L | 6412703..6412859 | 16..172 | 785 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:53:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Ulysses | 10653 | Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). | 4160..4230 | 521..592 | 123 | 65.3 | Plus |
BO25254.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-09 11:57:45 Download gff for
BO25254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 390..1376 | 17..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:29:35 Download gff for
BO25254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 390..1376 | 17..1005 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:37:57 Download gff for
BO25254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13982-RA | 390..1376 | 17..1005 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:37:57 Download gff for
BO25254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6412704..6412858 | 17..171 | 100 | -> | Plus |
| 2L | 6413181..6413366 | 172..357 | 100 | -> | Plus |
| 2L | 6413423..6414068 | 358..1005 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:29:35 Download gff for
BO25254.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6412704..6412858 | 17..171 | 100 | -> | Plus |
| arm_2L | 6413181..6413366 | 172..357 | 100 | -> | Plus |
| arm_2L | 6413423..6414068 | 358..1005 | 99 | | Plus |
BO25254.pep Sequence
Translation from 16 to 1021
> BO25254.pep
MGSCLGSCATAAAAPAHSACTSTSDSTTHSTSSTSSSLTTPPTSWVANSW
LWRKNRSAGRQDPEADLLSRTTRQRCQRNGFIYRILRLKKRQQCPSFLDK
YWEQQPSYAKLPTTAMADIQMQNLDAGKLLNAQTTPSRETEMGLGAYQRM
ANSRASSSLDLEWEHEYSQLRQYQYQCQQVPKELPPTPPKPRYASLDQLA
AANAMATSQGRHMARQARLSCQRHGGSLTRNSCCSSTQNSWSHISTPESL
EWDVDEEREQQRQLRLEDDNLDDRTLKLLHQIEQLKHHVLQETGDGLSME
SAAVEELTEGLQFRATHFAGDSQLEAHVSASFLDH
BO25254.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:01:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13982-PB | 329 | CG13982-PB | 1..329 | 1..329 | 1731 | 100 | Plus |
| CG13982-PA | 329 | CG13982-PA | 1..329 | 1..329 | 1731 | 100 | Plus |
