BO25273.complete Sequence
1090 bp assembled on 2010-06-15
GenBank Submission: KX799086
> BO25273.complete
GAAGTTATCAGTCGACATGTTTGCCACGCCCCTCAGACAGCCAGCTGCGG
CTAACCACCAGACCCCAAAGAATTCCGCCGGCATGGATGAGCATGGTAAG
CCGTATCAGTACGAGATTACCGATCACGGATACGGCAAGGATGCGGTCAA
GGTGCTGCATGTCAGCCGCAACGGACCCGTGCACGCCATCCAGGAATTCG
AGGTGGGCACTCACCTGAAGTTGTACAGCAAAAAGGATTACTACCAGGGC
AACAACTCGGACATCGTGGCCACCGATTCGCAGAAGAACACCGTCTATTT
GCTGGCGAAAAAGCATGGCATTGAAAGTCCCGAGAAGTTTGCTCTGCTCC
TGGCCAGGCACTTTATTAACAAATACTCGCACGTGGAGGAGGCGCACGTT
CATGTGGAGGCGTATCCCTGGCAGCGAGTTTGCCAGGAGGAGACCAGGAC
CAACGTCAATGGGAAGTGCGAGAACGGAGTCCAAGGGAACTGCGACTTCA
GCTCCATTGACAACAGATCACTGCACAATCACGCTTTTATATTCACGCCC
ACCGCTCTTCACTACTGCGATGTGGTTATAAGGAGAACAGATCCCAAACA
AACGGTCATCACGGGCATCAAGGGTCTCCGGGTGCTGAAGACGACCCAAT
CCTCGTTCGTGAACTTCGTGAACGATGAGTTCAGATCTCTGCCAGATCAG
TATGATCGCATCTTTAGCACCGTGGTGGATTGCTCCTGGGAGTACTCCGA
TACCGAGAACTTGGACTTCCTCAGGGCCTGGCAAACGGTCAAAAACATAA
TCATTCGTAACTTTGCTGGCGATCCGCAGGTGGGCGTGTCCTCGCCCTCC
GTTCAGCACACCCTGTATCTGAGTGAAAGACAGGTCCTGGATGTCCTGCC
GCAGGTGTCGGTCATTTCGATGACCATGCCAAACAAGCACTACTTCAACT
TCGATACGAAGCCCTTCCAGAAGATTGCACCCGGCGACAACAATGAAGTT
TTCATCCCAGTGGACAAGCCACATGGCACCATCTATGCCCAATTGGCCCG
GAAGAACATCAATAGTCACCTGGCAAGCTTTCTAGACCAT
BO25273.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uro-RA | 1059 | CG7171-PA | 1..1056 | 17..1072 | 5280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uro-RA | 1262 | CG7171-RA | 34..1089 | 17..1072 | 5280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 7780118..7780691 | 17..590 | 2870 | 100 | Plus |
2L | 23513712 | 2L | 7780759..7781242 | 589..1072 | 2420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:52:34 has no hits.
BO25273.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-15 11:12:14 Download gff for
BO25273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uro-RA | 40..1089 | 23..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:02 Download gff for
BO25273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uro-RA | 40..1089 | 23..1074 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:11 Download gff for
BO25273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Uro-RA | 40..1089 | 23..1074 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:11 Download gff for
BO25273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 7780124..7780691 | 23..590 | 100 | -> | Plus |
2L | 7780761..7781242 | 591..1074 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:02 Download gff for
BO25273.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 7780124..7780691 | 23..590 | 100 | -> | Plus |
arm_2L | 7780761..7781242 | 591..1074 | 99 | | Plus |
BO25273.pep Sequence
Translation from 16 to 1090
> BO25273.pep
MFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHVS
RNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKH
GIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGK
CENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITG
IKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENLD
FLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVI
SMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNINS
HLASFLDH
BO25273.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:00:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Uro-PA | 352 | CG7171-PA | 1..352 | 1..352 | 1882 | 100 | Plus |