Clone BO25273 Report

Search the DGRC for BO25273

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:252
Well:73
Vector:pDNR-Dual
Associated Gene/TranscriptUro-RA
Protein status:BO25273.pep: Imported from assembly
Sequenced Size:1090

Clone Sequence Records

BO25273.complete Sequence

1090 bp assembled on 2010-06-15

GenBank Submission: KX799086

> BO25273.complete
GAAGTTATCAGTCGACATGTTTGCCACGCCCCTCAGACAGCCAGCTGCGG
CTAACCACCAGACCCCAAAGAATTCCGCCGGCATGGATGAGCATGGTAAG
CCGTATCAGTACGAGATTACCGATCACGGATACGGCAAGGATGCGGTCAA
GGTGCTGCATGTCAGCCGCAACGGACCCGTGCACGCCATCCAGGAATTCG
AGGTGGGCACTCACCTGAAGTTGTACAGCAAAAAGGATTACTACCAGGGC
AACAACTCGGACATCGTGGCCACCGATTCGCAGAAGAACACCGTCTATTT
GCTGGCGAAAAAGCATGGCATTGAAAGTCCCGAGAAGTTTGCTCTGCTCC
TGGCCAGGCACTTTATTAACAAATACTCGCACGTGGAGGAGGCGCACGTT
CATGTGGAGGCGTATCCCTGGCAGCGAGTTTGCCAGGAGGAGACCAGGAC
CAACGTCAATGGGAAGTGCGAGAACGGAGTCCAAGGGAACTGCGACTTCA
GCTCCATTGACAACAGATCACTGCACAATCACGCTTTTATATTCACGCCC
ACCGCTCTTCACTACTGCGATGTGGTTATAAGGAGAACAGATCCCAAACA
AACGGTCATCACGGGCATCAAGGGTCTCCGGGTGCTGAAGACGACCCAAT
CCTCGTTCGTGAACTTCGTGAACGATGAGTTCAGATCTCTGCCAGATCAG
TATGATCGCATCTTTAGCACCGTGGTGGATTGCTCCTGGGAGTACTCCGA
TACCGAGAACTTGGACTTCCTCAGGGCCTGGCAAACGGTCAAAAACATAA
TCATTCGTAACTTTGCTGGCGATCCGCAGGTGGGCGTGTCCTCGCCCTCC
GTTCAGCACACCCTGTATCTGAGTGAAAGACAGGTCCTGGATGTCCTGCC
GCAGGTGTCGGTCATTTCGATGACCATGCCAAACAAGCACTACTTCAACT
TCGATACGAAGCCCTTCCAGAAGATTGCACCCGGCGACAACAATGAAGTT
TTCATCCCAGTGGACAAGCCACATGGCACCATCTATGCCCAATTGGCCCG
GAAGAACATCAATAGTCACCTGGCAAGCTTTCTAGACCAT

BO25273.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-RA 1059 CG7171-PA 1..1056 17..1072 5280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:35
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-RA 1262 CG7171-RA 34..1089 17..1072 5280 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:52:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 7780118..7780691 17..590 2870 100 Plus
2L 23513712 2L 7780759..7781242 589..1072 2420 100 Plus
Blast to na_te.dros performed on 2014-11-27 00:52:34 has no hits.

BO25273.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-15 11:12:14 Download gff for BO25273.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 40..1089 23..1074 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:02 Download gff for BO25273.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 40..1089 23..1074 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:11 Download gff for BO25273.complete
Subject Subject Range Query Range Percent Splice Strand
Uro-RA 40..1089 23..1074 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:11 Download gff for BO25273.complete
Subject Subject Range Query Range Percent Splice Strand
2L 7780124..7780691 23..590 100 -> Plus
2L 7780761..7781242 591..1074 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:02 Download gff for BO25273.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 7780124..7780691 23..590 100 -> Plus
arm_2L 7780761..7781242 591..1074 99   Plus

BO25273.pep Sequence

Translation from 16 to 1090

> BO25273.pep
MFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHVS
RNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKH
GIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGK
CENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITG
IKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENLD
FLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVI
SMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNINS
HLASFLDH

BO25273.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:00:13
Subject Length Description Subject Range Query Range Score Percent Strand
Uro-PA 352 CG7171-PA 1..352 1..352 1882 100 Plus