BO25301.complete Sequence
352 bp assembled on 2010-06-10
GenBank Submission: KX793814
> BO25301.complete
GAAGTTATCAGTCGACATGTCGTATCAACTGTACCGCAACACCACGCTCG
GCAACACCCTGCAGGAGAGCCTCGACGAGCTGATTCAGTACGGCCAGATT
ACGCCCGGACTGGCTTTCAAGGTTCTGCTGCAATTCGACAAGAGCATCAA
CAATGCCCTAAACCAGCGGGTCAAGGCCCGCGTCACCTTCAAGGCTGGAA
AACTAAACACCTACCGCTTCTGCGACAATGTCTGGACTCTCATGCTTAAC
GATGTGGAGTTCCGCGAAGTGCACGAGATCGTCAAGGTGGACAAGGTGAA
GATCGTGGCCTGCGACGGCAAGAGCGGCGAGTTCGCAAGCTTTCTAGACC
AT
BO25301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:02:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-RA | 321 | CG5163-PA | 1..318 | 17..334 | 1590 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-RA | 617 | CG5163-RA | 106..423 | 17..334 | 1590 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23890582..23890830 | 334..86 | 1245 | 100 | Minus |
3R | 32079331 | 3R | 23890884..23890955 | 88..17 | 360 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:02:13 has no hits.
BO25301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:41 Download gff for
BO25301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-RA | 102..419 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:32 Download gff for
BO25301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-RA | 106..423 | 17..336 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:15 Download gff for
BO25301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
TfIIA-S-RA | 106..423 | 17..336 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:15 Download gff for
BO25301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23890579..23890827 | 89..336 | 99 | <- | Minus |
3R | 23890884..23890955 | 17..88 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:32 Download gff for
BO25301.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 19716301..19716549 | 89..336 | 99 | <- | Minus |
arm_3R | 19716606..19716677 | 17..88 | 100 | | Minus |
BO25301.pep Sequence
Translation from 16 to 352
> BO25301.pep
MSYQLYRNTTLGNTLQESLDELIQYGQITPGLAFKVLLQFDKSINNALNQ
RVKARVTFKAGKLNTYRFCDNVWTLMLNDVEFREVHEIVKVDKVKIVACD
GKSGEFASFLDH
BO25301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
TfIIA-S-PA | 106 | CG5163-PA | 1..106 | 1..106 | 547 | 100 | Plus |
TfIIA-S-2-PA | 107 | CG11639-PA | 1..101 | 1..101 | 278 | 55.4 | Plus |