Clone BO25305 Report

Search the DGRC for BO25305

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCG11149-RA
Protein status:BO25305.pep: Imported from assembly
Sequenced Size:1513

Clone Sequence Records

BO25305.complete Sequence

1513 bp assembled on 2010-06-10

GenBank Submission: KX794962

> BO25305.complete
GAAGTTATCAGTCGACATGGCGACCATAAGTTTTTGCAATAGGAAATATG
TCCGTCTGTGGCCAGTGCTCATACTGTTCAATGTGGCACTCCTGCTGGTT
TGGAGGAACCTGCAGCAGGCCCAGAAACTGGCCGCATCTTCTAATACTGG
TGGGCAAAAGTCGGTAGGACTTTTGCTGTCCAACGAGTCGAATCCCTCAC
GTTTTTCTGCAAACTTCCATCTCGCCAATGATCAGCATCCGAAAATAATC
CGGCGAGAGGACTCCGCTCGCACCAAGGAATTGCGATCATTGCTCAAGTG
CCGCGACCGATCGCTCCGTTTCGAGAGGCTTCAGCACGGAGAGTTCTGGC
TGCTTCAGAATCTTGTCATGGGACGAAAGAGTCGGGAAGTCGGCTGTGCC
GAGTCCGTGACGTATACCACCAACGGGGACTTTACGTTCTTCGATAATCT
GGAAATGGTGGTATCACGTTGGCGTGCTCCAGTTAGTTTTGCCATCCACA
CTCCAGGTTATGATCTTAACACCACACTGGATGCCATTCGGTATGTGCGA
AACTGTTTGCCGGAGAGCGATAGCATCAAGGACTGGGTCTCCTTTCACGT
GTACTTCCCAAATCAGCACATGCCGGAATACGTGCCATATGACGAGGCCG
AGGTACTAATGTATCCGCACATGTGCACCCTGGCCAATGGATCGTTGGTA
TCGCCGCTCTACACGCAAATCCCAACCACGGATAGCTACAAGTCAAGGGC
CAACCTCACGTACCCCATCAATGTGGGCAGGAATATAGCCAGGCTGGCGA
CCAACACCCACTTCATCTTTGCCTGCGACATCGAGCTGTATCCCAGTGTG
GGCTTCGTCGACCAATTCCTGGACATGGTGGCCAGAAACCACAGTGTCCT
TGCACTGGATCCGCGGCAACGCAGAAGGGTGTATCCTCTACCCGTTTTCG
AGATCGAAACGGGCGCCAAAGTGCCGGTAGACAAGGACGAATTGTTGGCC
CTCTATCGAAAGCAGCAGGCGCAGGTGTTTCACCTGAAGCTTTGCCCCAC
ATGCCACACTATTCCTGGCCAAGAAGAGTGGCTCAATCGAACCTCTCGAG
CCGATGACCATCTGCACGTGTTTAGCAAGGCGCTGCGAAAATGGAAGTTC
CGAGCCTGGGAGCCCTTCTATGTAAGCGATAACACGGAGCCACTGTTCGA
CGAACGCGTCACGTGGGAGGGTCAGTCGAACAAGCGCATACAGGTGAGTT
ACTACTGTAGTCAAGTTTCCGTTTCACAGTGCAACCTTTTATTGCAGAAC
TATGCTATGTGCCTTTTGGACTACGAATACCATGTCTTGAGTCCCGCATT
TCTAGTGCACAGTCCTGGGATCAAGCAATCCAGCAAAGCTGACTCCACTC
GTCTTCAATACGCGAAGGAAATGACTAAATTTATTAAGAATAAAATCGAG
CCCGAATATCGTGTGCTCTTCGGAAAGAACTCAGCCTGCAAGACGGCAAG
CTTTCTAGACCAT

BO25305.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:02:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG11149-RA 1482 CG11149-PA 1..1479 17..1495 7395 100 Plus
CG11149-RB 1482 CG11149-PB 1..1479 17..1495 7395 100 Plus
CG11149-RE 1428 CG11149-PE 1..1227 17..1243 6135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG11149-RA 1995 CG11149-RA 233..1712 16..1495 7400 100 Plus
CG11149-RB 1952 CG11149-RB 190..1669 16..1495 7400 100 Plus
CG11149-RE 1999 CG11149-RE 291..1518 16..1243 6140 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:32
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 5718404..5719431 1495..468 5140 100 Minus
2L 23513712 2L 5719511..5719963 468..16 2265 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:02:33 has no hits.

BO25305.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:45 Download gff for BO25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG11149-RA 234..1712 17..1497 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:40 Download gff for BO25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG11149-RB 191..1669 17..1497 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:23 Download gff for BO25305.complete
Subject Subject Range Query Range Percent Splice Strand
CG11149-RB 191..1669 17..1497 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:23 Download gff for BO25305.complete
Subject Subject Range Query Range Percent Splice Strand
2L 5718400..5719430 469..1497 99 <- Minus
2L 5719511..5719962 17..468 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:40 Download gff for BO25305.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 5718400..5719430 469..1497 99 <- Minus
arm_2L 5719511..5719962 17..468 100   Minus

BO25305.pep Sequence

Translation from 16 to 1513

> BO25305.pep
MATISFCNRKYVRLWPVLILFNVALLLVWRNLQQAQKLAASSNTGGQKSV
GLLLSNESNPSRFSANFHLANDQHPKIIRREDSARTKELRSLLKCRDRSL
RFERLQHGEFWLLQNLVMGRKSREVGCAESVTYTTNGDFTFFDNLEMVVS
RWRAPVSFAIHTPGYDLNTTLDAIRYVRNCLPESDSIKDWVSFHVYFPNQ
HMPEYVPYDEAEVLMYPHMCTLANGSLVSPLYTQIPTTDSYKSRANLTYP
INVGRNIARLATNTHFIFACDIELYPSVGFVDQFLDMVARNHSVLALDPR
QRRRVYPLPVFEIETGAKVPVDKDELLALYRKQQAQVFHLKLCPTCHTIP
GQEEWLNRTSRADDHLHVFSKALRKWKFRAWEPFYVSDNTEPLFDERVTW
EGQSNKRIQVSYYCSQVSVSQCNLLLQNYAMCLLDYEYHVLSPAFLVHSP
GIKQSSKADSTRLQYAKEMTKFIKNKIEPEYRVLFGKNSACKTASFLDH

BO25305.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:40
Subject Length Description Subject Range Query Range Score Percent Strand
CG11149-PA 493 CG11149-PA 1..493 1..493 2621 100 Plus
CG11149-PB 493 CG11149-PB 1..493 1..493 2621 100 Plus
CG11149-PE 475 CG11149-PE 1..475 1..493 2499 96.3 Plus
CG11149-PD 475 CG11149-PD 1..475 1..493 2499 96.3 Plus
CG11149-PC 475 CG11149-PC 1..475 1..493 2499 96.3 Plus