Clone BO25307 Report

Search the DGRC for BO25307

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG34195-RA
Protein status:BO25307.pep: Imported from assembly
Sequenced Size:883

Clone Sequence Records

BO25307.complete Sequence

883 bp assembled on 2010-06-10

GenBank Submission: KX799212

> BO25307.complete
GAAGTTATCAGTCGACATGGAACCCCTAGAACCGGACGTTATTACCACCC
AAGCAAAGGAACTGTCGGCGGTGGAGCGACAAAAGTTGGACGAGCAAAAC
AAGCGTGGTCTCGTGCCCGAATACAAAGCGAACAAGTTGGAAATCGATGC
CCAGAGGAACTGGGATATATTCTACAAGCGAAATGAGACTCGTTTCTTTA
AGGACCGCCACTGGACAACGCGTGAGTTCCAGGAGCTGCTGGACCAGGAG
GAGTTCCACGAGAAACGAACACTTTTCGAAGTGGGATGCGGTGTGGGCAA
CCTGGTATTCCCGCTGCTGGAAGAACAAACCAGCGAAGAGGGATGTTTCA
GCAATAGCAGATTCTTCTTCTACGCGTGCGATTTCTCACCGCGAGCAGTG
GAATTCGTGCGCTCCAATCCTCTGTACGATCCCAGCCAGATATCTGCCTT
TCAGTGTGATATCACAACGCAACAGGTGCATGACCACATCCCTCCCAGCA
GCGTGGACATTTGCACGCTGATCTTTGTGCTCTCCGCCATACATCCACAG
AAGTTCAAAGATGTGGTGCAGAACCTGGGAAAGCTACTAAAGCCAGGAGG
ACTGCTTCTGTTTAGGGATTACGGTCTCTACGACATGGCACAGTTGCGCT
TTAAGCCGGGCAACAAGATAGCAGAGAACCTCTATGTAAGACAGGATGGC
ACCCGTAGCTACTTCTTTTCAGAGGAGGAAGTATCCAAGCTGTTTCAGGA
GAACGGCTTTGAGGTCATTACCAATGCCTATGTCCATCGTCGAACTCTAA
ATCTTAAGGAAGGCGTGGATGTGCCGCGCATTTTTCTGCAAGGCAAGTTT
AGGAGGAAAAACCTGGCAAGCTTTCTAGACCAT

BO25307.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:02:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-RA 852 CG34195-PA 1..849 17..865 4245 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-RA 1184 CG34195-RA 230..1080 15..865 4255 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:38
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17733533..17734379 19..865 4235 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:02:39 has no hits.

BO25307.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:47 Download gff for BO25307.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 215..1063 17..867 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:42 Download gff for BO25307.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 232..1080 17..867 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:25 Download gff for BO25307.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 232..1080 17..867 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:25 Download gff for BO25307.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17733532..17734379 17..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:42 Download gff for BO25307.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13621037..13621884 17..867 99   Plus

BO25307.pep Sequence

Translation from 16 to 883

> BO25307.pep
MEPLEPDVITTQAKELSAVERQKLDEQNKRGLVPEYKANKLEIDAQRNWD
IFYKRNETRFFKDRHWTTREFQELLDQEEFHEKRTLFEVGCGVGNLVFPL
LEEQTSEEGCFSNSRFFFYACDFSPRAVEFVRSNPLYDPSQISAFQCDIT
TQQVHDHIPPSSVDICTLIFVLSAIHPQKFKDVVQNLGKLLKPGGLLLFR
DYGLYDMAQLRFKPGNKIAENLYVRQDGTRSYFFSEEEVSKLFQENGFEV
ITNAYVHRRTLNLKEGVDVPRIFLQGKFRRKNLASFLDH

BO25307.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-PA 283 CG34195-PA 1..283 1..283 1493 100 Plus
metl-PA 302 CG13929-PA 51..300 27..280 480 39.7 Plus
metl-PB 325 CG13929-PB 74..323 27..280 480 39.7 Plus