BO25307.complete Sequence
883 bp assembled on 2010-06-10
GenBank Submission: KX799212
> BO25307.complete
GAAGTTATCAGTCGACATGGAACCCCTAGAACCGGACGTTATTACCACCC
AAGCAAAGGAACTGTCGGCGGTGGAGCGACAAAAGTTGGACGAGCAAAAC
AAGCGTGGTCTCGTGCCCGAATACAAAGCGAACAAGTTGGAAATCGATGC
CCAGAGGAACTGGGATATATTCTACAAGCGAAATGAGACTCGTTTCTTTA
AGGACCGCCACTGGACAACGCGTGAGTTCCAGGAGCTGCTGGACCAGGAG
GAGTTCCACGAGAAACGAACACTTTTCGAAGTGGGATGCGGTGTGGGCAA
CCTGGTATTCCCGCTGCTGGAAGAACAAACCAGCGAAGAGGGATGTTTCA
GCAATAGCAGATTCTTCTTCTACGCGTGCGATTTCTCACCGCGAGCAGTG
GAATTCGTGCGCTCCAATCCTCTGTACGATCCCAGCCAGATATCTGCCTT
TCAGTGTGATATCACAACGCAACAGGTGCATGACCACATCCCTCCCAGCA
GCGTGGACATTTGCACGCTGATCTTTGTGCTCTCCGCCATACATCCACAG
AAGTTCAAAGATGTGGTGCAGAACCTGGGAAAGCTACTAAAGCCAGGAGG
ACTGCTTCTGTTTAGGGATTACGGTCTCTACGACATGGCACAGTTGCGCT
TTAAGCCGGGCAACAAGATAGCAGAGAACCTCTATGTAAGACAGGATGGC
ACCCGTAGCTACTTCTTTTCAGAGGAGGAAGTATCCAAGCTGTTTCAGGA
GAACGGCTTTGAGGTCATTACCAATGCCTATGTCCATCGTCGAACTCTAA
ATCTTAAGGAAGGCGTGGATGTGCCGCGCATTTTTCTGCAAGGCAAGTTT
AGGAGGAAAAACCTGGCAAGCTTTCTAGACCAT
BO25307.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:02:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-RA | 852 | CG34195-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:02:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-RA | 1184 | CG34195-RA | 230..1080 | 15..865 | 4255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:02:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17733533..17734379 | 19..865 | 4235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:02:39 has no hits.
BO25307.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:47 Download gff for
BO25307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 215..1063 | 17..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:42 Download gff for
BO25307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 232..1080 | 17..867 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:25 Download gff for
BO25307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 232..1080 | 17..867 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:25 Download gff for
BO25307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17733532..17734379 | 17..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:42 Download gff for
BO25307.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13621037..13621884 | 17..867 | 99 | | Plus |
BO25307.pep Sequence
Translation from 16 to 883
> BO25307.pep
MEPLEPDVITTQAKELSAVERQKLDEQNKRGLVPEYKANKLEIDAQRNWD
IFYKRNETRFFKDRHWTTREFQELLDQEEFHEKRTLFEVGCGVGNLVFPL
LEEQTSEEGCFSNSRFFFYACDFSPRAVEFVRSNPLYDPSQISAFQCDIT
TQQVHDHIPPSSVDICTLIFVLSAIHPQKFKDVVQNLGKLLKPGGLLLFR
DYGLYDMAQLRFKPGNKIAENLYVRQDGTRSYFFSEEEVSKLFQENGFEV
ITNAYVHRRTLNLKEGVDVPRIFLQGKFRRKNLASFLDH
BO25307.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-PA | 283 | CG34195-PA | 1..283 | 1..283 | 1493 | 100 | Plus |
metl-PA | 302 | CG13929-PA | 51..300 | 27..280 | 480 | 39.7 | Plus |
metl-PB | 325 | CG13929-PB | 74..323 | 27..280 | 480 | 39.7 | Plus |