BO25317.complete Sequence
1015 bp assembled on 2010-06-10
GenBank Submission: KX799127
> BO25317.complete
GAAGTTATCAGTCGACATGTCGCAGGTATCAACCCTCATCGATGTGGACA
AGCCACTCTTCGATCTCAGCACCTTCGCTGGGCGCTTCCAGTACTTCGCC
TGGATGACGGACCCCCGCACCGTAGTCGTATCCAGCGATCGCCTGCTGGA
AGCCAAAGCAATGGTTGAACGCTACCGGAAAGGTGACCAATCCCCGCCGC
TGAAGCCGGAGGAGGTGCACTACAACATGAAGCTGTACAACTCAGCCTTT
CATCCGGATACCGGCGAGCTGCAGAACTTTTGCGGCCGCATGAGTTTTCA
GGTACCCGGAGGCATGTTGATCACCGGTGGCATGCTGGCCTTCTATCGCA
CCGTGCCCGCCGTGGTGCTCTGGCAGTTCATCAACCAGTCCTTCAATGCG
GTTGTTAACTACACGAATCGCAATGCCAACTCGCCAACTAGCGTTACGCA
GCTGGGCGTGGCCTATGTATCCGCCACGACATCGGCTCTGGTAGCTGCTA
TTGGATGCAAGAACTATTGGTCAAAGAAAGCGACTCCGCTGTTCCAAAGA
TTTGTGCCCTTCGCAGCTGTGGCGGCAGCCAACTTCGTGAACATTCCGCT
GATGCGACAAAATGAGATAATCAATGGCATAGAGGTGAAGAACGACGATG
GAGTGGTTGTGGGCCAGAGTAGATTGGCAGCCATCAAAGGAATCGGTGAG
GTGGTTGTGTCCAGGATTGCGATGGCGGCGCCCGGAATGCTGGTGCTGCC
ATTGATAATGGAGAGGCTGGAGAAACTGCCTGCCTACAGGCGCATCAAGT
GGATTAATGCTCCATTCCAGACCCTTTTGGTTGGGTGCTTCCTTTGCTTC
ATGGTGCCCACTGCCTGCGCCCTGTTCCCACAGCAGTGTTCCTTGGACAC
TTCGATTATGCGCACCTTCGAGCCCGAACTTTACGAGGACCTCGAGAAGA
AAACTCAGGGCAAAGTGCCCAAGCGTGTCTACTTCAACAAGGGTCTGGCA
AGCTTTCTAGACCAT
BO25317.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6812-RA | 984 | CG6812-PA | 1..981 | 17..997 | 4905 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6812-RA | 2062 | CG6812-RA | 537..1517 | 17..997 | 4905 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 19064840..19065383 | 297..840 | 2720 | 100 | Plus |
| 3L | 28110227 | 3L | 19064327..19064596 | 33..302 | 1350 | 100 | Plus |
| 3L | 28110227 | 3L | 19065450..19065606 | 841..997 | 785 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:03:15 has no hits.
BO25317.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:52 Download gff for
BO25317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 530..1510 | 17..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:55 Download gff for
BO25317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 537..1517 | 17..999 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:35 Download gff for
BO25317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6812-RA | 537..1517 | 17..999 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:35 Download gff for
BO25317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 19063701..19063716 | 17..32 | 100 | -> | Plus |
| 3L | 19064327..19064595 | 33..301 | 100 | -> | Plus |
| 3L | 19064845..19065383 | 302..840 | 100 | -> | Plus |
| 3L | 19065450..19065606 | 841..999 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:55 Download gff for
BO25317.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 19056801..19056816 | 17..32 | 100 | -> | Plus |
| arm_3L | 19057427..19057695 | 33..301 | 100 | -> | Plus |
| arm_3L | 19057945..19058483 | 302..840 | 100 | -> | Plus |
| arm_3L | 19058550..19058706 | 841..999 | 98 | | Plus |
BO25317.pep Sequence
Translation from 16 to 1015
> BO25317.pep
MSQVSTLIDVDKPLFDLSTFAGRFQYFAWMTDPRTVVVSSDRLLEAKAMV
ERYRKGDQSPPLKPEEVHYNMKLYNSAFHPDTGELQNFCGRMSFQVPGGM
LITGGMLAFYRTVPAVVLWQFINQSFNAVVNYTNRNANSPTSVTQLGVAY
VSATTSALVAAIGCKNYWSKKATPLFQRFVPFAAVAAANFVNIPLMRQNE
IINGIEVKNDDGVVVGQSRLAAIKGIGEVVVSRIAMAAPGMLVLPLIMER
LEKLPAYRRIKWINAPFQTLLVGCFLCFMVPTACALFPQQCSLDTSIMRT
FEPELYEDLEKKTQGKVPKRVYFNKGLASFLDH
BO25317.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6812-PA | 327 | CG6812-PA | 1..327 | 1..327 | 1695 | 100 | Plus |
| CG11739-PB | 321 | CG11739-PB | 7..321 | 8..327 | 641 | 43 | Plus |
| CG11739-PD | 321 | CG11739-PD | 7..321 | 8..327 | 641 | 43 | Plus |
| CG11739-PA | 321 | CG11739-PA | 7..321 | 8..327 | 641 | 43 | Plus |
| CG11739-PC | 321 | CG11739-PC | 7..321 | 8..327 | 641 | 43 | Plus |
