BO25323.complete Sequence
1117 bp assembled on 2010-06-10
GenBank Submission: KX797762
> BO25323.complete
GAAGTTATCAGTCGACATGGATCCGATGATTTGTGATCTGTGGTCTGGCC
GCATTTGGCTATTGATACTCATTTGCCTGTGCGGCTTTCAGCAGTCCCGC
TGTTTTTTTGTTGACTATACAGAGAACACAGAGTTAATTCAACAGAGAGC
CGGATTCGATGTCAAGCTGCAGTGCAATCTCAAAGGTCTGGTCGATGAGA
GTATGCTGAATGACATCAAGATACATTGGTACTTTAAGCAATGCAGCGAA
AACAATTGCCATCAGTTGGGATCTGTGGACGAGTGGACTGCTCTGCCATG
TGAGCCGAGTCTTTGTCGTCCGGAACTCTGGCTCCGGAATGTGACGGAGC
GGTATTCGGGACTGTACAAATGCAGCATTAATCCGCACATTTGGGATAAA
GCCCAGGCTGTGGATGTTCAACTGGTTCGCACCTATCAGCTGGATGTTAA
AAACACCTCATTGGCAGCCCCTGAGTTTGTGGACTCGTATCCCAACAACA
AGACCACATTGGTGGGCAGTAGGGTGGTGTTCCAGTGCCGTGTTCACAGC
GAGGAGCATCCCACAATCAAGTGGTTTCGCCGGCAGACGTACGTGGGAAC
TCAGTCAGGTGGCGAAGCCTCCTCGGCACCCACAACCTCAAATTTTAGCA
ACCATATTGTCCGGTACAATGGTCGAACATATGAACTACTGTCCACCGAT
CCAGAAAAGATGATGGCACCCCAGATATATCTCAGCAAATTGATTCTGGA
CGGAGTGAGATTACGAGATGCCGGACACTACGCCTGCGTGGCCATCAGCT
ATCGAGGCCATAAGATCCGCGAGGCTTTCCTGGATGTGCTGGCCGATGTG
GAGGATACGGATCAGGAGAATGAGTACTGGTCGGACTACGGTAATGAAGA
TGAGGGAGTTCCGACTAGCGATCGACGGGAGTTCCTGCTGCTCTTCCTTA
TGCCACTGGGATTGGCTCTTCTTCCATTGACCGTGTGGTTCAGTTATCTG
TTGTACAAACGTTGCTCTGTGGGACACGGCGATTGCCAGCGAATAGATTC
GGACGAGGATCTGGACACGGAAAGGTGTGTCCTCGGGGGAAACAAGCATG
CAAGCTTTCTAGACCAT
BO25323.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:03:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31431-RC | 1086 | CG31431-PC | 1..1083 | 17..1099 | 5415 | 100 | Plus |
| CG31431-RB | 1086 | CG31431-PB | 1..1083 | 17..1099 | 5415 | 100 | Plus |
| CG31431-RA | 1086 | CG31431-PA | 1..1083 | 17..1099 | 5415 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31431-RC | 1595 | CG31431-RC | 384..1473 | 10..1099 | 5420 | 99.8 | Plus |
| CG31431-RB | 1685 | CG31431-RB | 480..1569 | 10..1099 | 5420 | 99.8 | Plus |
| CG31431-RA | 1585 | CG31431-RA | 374..1463 | 10..1099 | 5420 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21872872..21873518 | 453..1099 | 3235 | 100 | Plus |
| 3R | 32079331 | 3R | 21872582..21872801 | 233..452 | 1085 | 99.5 | Plus |
| 3R | 32079331 | 3R | 21872407..21872525 | 120..238 | 595 | 100 | Plus |
| 3R | 32079331 | 3R | 21872028..21872140 | 10..122 | 535 | 98.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:03:55 has no hits.
BO25323.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:58 Download gff for
BO25323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31431-RA | 378..1460 | 17..1101 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:14 Download gff for
BO25323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31431-RA | 381..1463 | 17..1101 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:48 Download gff for
BO25323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31431-RA | 381..1463 | 17..1101 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:48 Download gff for
BO25323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21872035..21872140 | 17..122 | 100 | -> | Plus |
| 3R | 21872410..21872525 | 123..238 | 100 | -> | Plus |
| 3R | 21872588..21872801 | 239..452 | 100 | -> | Plus |
| 3R | 21872872..21873518 | 453..1101 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:14 Download gff for
BO25323.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17697757..17697862 | 17..122 | 100 | -> | Plus |
| arm_3R | 17698132..17698247 | 123..238 | 100 | -> | Plus |
| arm_3R | 17698310..17698523 | 239..452 | 100 | -> | Plus |
| arm_3R | 17698594..17699240 | 453..1101 | 99 | | Plus |
BO25323.pep Sequence
Translation from 16 to 1117
> BO25323.pep
MDPMICDLWSGRIWLLILICLCGFQQSRCFFVDYTENTELIQQRAGFDVK
LQCNLKGLVDESMLNDIKIHWYFKQCSENNCHQLGSVDEWTALPCEPSLC
RPELWLRNVTERYSGLYKCSINPHIWDKAQAVDVQLVRTYQLDVKNTSLA
APEFVDSYPNNKTTLVGSRVVFQCRVHSEEHPTIKWFRRQTYVGTQSGGE
ASSAPTTSNFSNHIVRYNGRTYELLSTDPEKMMAPQIYLSKLILDGVRLR
DAGHYACVAISYRGHKIREAFLDVLADVEDTDQENEYWSDYGNEDEGVPT
SDRREFLLLFLMPLGLALLPLTVWFSYLLYKRCSVGHGDCQRIDSDEDLD
TERCVLGGNKHASFLDH
BO25323.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31431-PC | 361 | CG31431-PC | 1..361 | 1..361 | 1964 | 100 | Plus |
| CG31431-PB | 361 | CG31431-PB | 1..361 | 1..361 | 1964 | 100 | Plus |
| CG31431-PA | 361 | CG31431-PA | 1..361 | 1..361 | 1964 | 100 | Plus |
