BO25330.complete Sequence
790 bp assembled on 2010-06-10
GenBank Submission: KX800035
> BO25330.complete
GAAGTTATCAGTCGACATGTCGATGAGCAATTTATCAATAGACGGCGAGT
TCCGCTACATAATTCAGTGGTTCAACGAGTGGAGTGAACTGCAGCGGGAT
GACTTTGTCTACGTTTTCGTGGAGTACCTGGCCAGGGGATCCAGTTCTGG
CGCCAGCGATGGCCAGGTGAATGGATTGGTCAACTCGCTGGCCAACGCAG
CAGTGCAGGACAAGCCCATGAGCCTGTTCCAATGCCGCATTAAGCTGTTC
CGTGAATGGAGCCCCAAGTGGCCGATCGAGTTCAAATGCAAGCTGCAGGA
GAAGATCAGTGAGATCGACGCGAAGGTGGGGGAGAAGATCATCAATGAGC
TTCGGGGGCCCCATTCCGTGCACAATGGCGACGTAGCCGTACATTTAAAT
GCAAATGGAGCGAGCGAAGAGGGCGGAGACTCCGAACTGGAGCAGATGCC
AGAGTCAGAAGTGACGGAGGTCGCCACTTTGGCGGCGGGGCAAGAAGCTG
ATCCAGCTCCCGAAGCAGATGACAATCGCTTGGCGGCGGTCTTAAGCCAA
GAAACGCCCGTTGATGACGACGACGTGGAAAAGTCTGCCGGTGAAGATTG
CAATAGTAATGCCGATGTAAATGGCCATTATCCAGCGGCTGCAGTGACAA
CGATTGCGGTGAATATATCACCATCGCCATCCCCCACTCCCCAGCCGATT
GTTGAACCTGTAGAACAGGTCGAGAATAGCGTTACAGTCACCGTGGCTTC
TCCAGAAGTTCCCCCCGTGGCTGCAAGCTTTCTAGACCAT
BO25330.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12948-RB | 759 | CG12948-PB | 1..756 | 17..772 | 3765 | 99.9 | Plus |
| CG12948-RA | 759 | CG12948-PA | 1..756 | 17..772 | 3765 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:04:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12948-RB | 1519 | CG12948-RB | 476..1231 | 17..772 | 3765 | 99.9 | Plus |
| CG12948-RA | 1281 | CG12948-RA | 238..993 | 17..772 | 3765 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 9746455..9746988 | 772..239 | 2670 | 100 | Minus |
| 3R | 32079331 | 3R | 9747048..9747269 | 238..17 | 1095 | 99.5 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:04:17 has no hits.
BO25330.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:00 Download gff for
BO25330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12948-RA | 264..1019 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:24 Download gff for
BO25330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12948-RA | 264..1019 | 17..774 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:58 Download gff for
BO25330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12948-RA | 238..993 | 17..774 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:58 Download gff for
BO25330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 9746453..9746988 | 239..774 | 99 | <- | Minus |
| 3R | 9747048..9747269 | 17..238 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:24 Download gff for
BO25330.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5572175..5572710 | 239..774 | 99 | <- | Minus |
| arm_3R | 5572770..5572991 | 17..238 | 99 | | Minus |
BO25330.pep Sequence
Translation from 16 to 790
> BO25330.pep
MSMSNLSIDGEFRYIIQWFNEWSELQRDDFVYVFVEYLARGSSSGASDGQ
VNGLVNSLANAAVQDKPMSLFQCRIKLFREWSPKWPIEFKCKLQEKISEI
DAKVGEKIINELRGPHSVHNGDVAVHLNANGASEEGGDSELEQMPESEVT
EVATLAAGQEADPAPEADDNRLAAVLSQETPVDDDDVEKSAGEDCNSNAD
VNGHYPAAAVTTIAVNISPSPSPTPQPIVEPVEQVENSVTVTVASPEVPP
VAASFLDH
BO25330.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12948-PB | 252 | CG12948-PB | 1..252 | 1..252 | 1304 | 100 | Plus |
| CG12948-PA | 252 | CG12948-PA | 1..252 | 1..252 | 1304 | 100 | Plus |
