BO25338.complete Sequence
718 bp assembled on 2010-06-10
GenBank Submission: KX794216
> BO25338.complete
GAAGTTATCAGTCGACATGTCCGCTCCCATTCGCTACTACTATGACCTGA
TGTCGCAGCCCTCGAGGGCGTTGTTCATTATCTTCCGGCTGAGCAACATG
CCCTTCGAAGACTGCGTGGTTGCCCTGCGCAATGGCGAGCACTTGACCGA
AGACTTCAAGAAGGAGATTAACCGCTTCCAGCGTGTGCCCTGCATCCACG
ACAATGGCTACAAGCTAGCGGAGAGCGTGGCCATCCTGCGCTATTTGAGC
GCCAAGGGCAAGATACCGGAGCACCTCTATCCCAAGTACTTCGTTGACCA
GAGCCGCGTCGACGAGTTCCTCGAATGGCAGCACATGTCCCTGCGGCTCA
CCTGCGCCATGTACTTCCGCACCGTGTGGCTGGAGCCGCTTCTGACAGGA
CGCACACCCTCCGAAGCCAAAATCGAGACGTTCCGCATGCAGATGGAGCG
CAACCTCGACGTAGTCGAGGAGGTCTGGCTGGAGGGCAAGGACTTCCTCA
CCGGATCCTCCCTCACCGTTGCGGACATCTTTGCAGCCTGTGAAATCGAA
CAGACACGAATGGCCGACTACGATGTCAGGATCAAGTACCCCAAGATCAG
GGCGTGGCTGAAGAGAGTGCGCCAGAGCTGCAATCCGTACTACGATGTGG
CCCACGAGTTCGTCTACAAAATCTCCGGAACGGGTCCACAGGCCAAGCTA
GCAAGCTTTCTAGACCAT
BO25338.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:04:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-RB | 807 | CG1702-PB | 121..804 | 17..700 | 3420 | 100 | Plus |
| GstT3-RC | 687 | CG1702-PC | 1..684 | 17..700 | 3420 | 100 | Plus |
| GstT3-RA | 687 | CG1702-PA | 1..684 | 17..700 | 3420 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-RB | 978 | CG1702-RB | 161..844 | 17..700 | 3420 | 100 | Plus |
| GstT3-RC | 1369 | CG1702-RC | 552..1235 | 17..700 | 3420 | 100 | Plus |
| GstT3-RA | 875 | CG1702-RA | 58..741 | 17..700 | 3420 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:04:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 20469035..20469459 | 134..558 | 2125 | 100 | Plus |
| X | 23542271 | X | 20469520..20469662 | 558..700 | 715 | 100 | Plus |
| X | 23542271 | X | 20468576..20468694 | 17..135 | 595 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:04:58 has no hits.
BO25338.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:10 Download gff for
BO25338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1702-RB | 121..804 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:42 Download gff for
BO25338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..741 | 17..702 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:16 Download gff for
BO25338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| GstT3-RA | 58..741 | 17..702 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:16 Download gff for
BO25338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 20468576..20468693 | 17..134 | 100 | -> | Plus |
| X | 20469036..20469458 | 135..557 | 100 | -> | Plus |
| X | 20469520..20469662 | 558..702 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:42 Download gff for
BO25338.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 20339603..20339720 | 17..134 | 100 | -> | Plus |
| arm_X | 20340063..20340485 | 135..557 | 100 | -> | Plus |
| arm_X | 20340547..20340689 | 558..702 | 98 | | Plus |
BO25338.pep Sequence
Translation from 16 to 718
> BO25338.pep
MSAPIRYYYDLMSQPSRALFIIFRLSNMPFEDCVVALRNGEHLTEDFKKE
INRFQRVPCIHDNGYKLAESVAILRYLSAKGKIPEHLYPKYFVDQSRVDE
FLEWQHMSLRLTCAMYFRTVWLEPLLTGRTPSEAKIETFRMQMERNLDVV
EEVWLEGKDFLTGSSLTVADIFAACEIEQTRMADYDVRIKYPKIRAWLKR
VRQSCNPYYDVAHEFVYKISGTGPQAKLASFLDH
BO25338.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| GstT3-PC | 228 | CG1702-PC | 1..228 | 1..228 | 1208 | 100 | Plus |
| GstT3-PA | 228 | CG1702-PA | 1..228 | 1..228 | 1208 | 100 | Plus |
| GstT3-PB | 268 | CG1702-PB | 41..268 | 1..228 | 1208 | 100 | Plus |
| GstT1-PA | 228 | CG30000-PA | 1..227 | 1..227 | 593 | 51.1 | Plus |
| GstT2-PA | 228 | CG30005-PA | 1..228 | 1..228 | 532 | 47.8 | Plus |
