BO25340.complete Sequence
1018 bp assembled on 2010-06-10
GenBank Submission: KX795588
> BO25340.complete
GAAGTTATCAGTCGACATGTCCAAGGATCACTGGATGAGGGATCTGCCAA
GCGAGTTGCGTGACCTGTCGATAATCAATCTGGCTATTCCAGGTTCCCAC
AATTCGATGACTTATGGCATAAATAGCAAGTCCGAACTATCGCCAGATGC
GGAAATTTCGATTAGGCGGTGGCATCGCTTCTTTCCCTGCTTCGTGCGCC
GTTGGAGCAAGACGCAATCTTCTGGAACACTGGATCAACTGGAGCTGGGA
GTGCGGTACTTTGACCTAAGGATAGCCCAGAAGGATGATAAGTTCTACTA
CTGTCATGGCCTTTTTGCCATGGAGATTTTTGAGCCACTTCTGGAGATTC
GCCAGTTCGTGGACACCCATCCAGAGGAGGTGGTAATCCTGGATCTGCAG
CACTTTTACGCCATGACAGTGGCTCATCACCAGAAGCTGCACAAGGATCT
GATCCAGTTCTTCGCCCATCGTCTGTACTCCACAGTGGATGGTTCACTCA
AGGATTGTACTCTGAATAGATGCTTGGAAATGCAGCGCAGCGTGGTGATC
ATCTACAGGCGATGTCCCATTCCACTGCCGCTGAGATTCTGGCCCAGTTA
TGCGTGGCCCACACCGTGGCCCAATAAAGCGAGTGTCAAGAAGCTGCAGT
CCTTTCTGGAGGATTCCCTACTCTCGCGACAGCCCCAACAGGGTTATGTC
TCCCAGTGCCTTATCACGCCCACTGGTCGCTATATCGCCTTCCGGCTCTT
CTTCACCCTGAAGAGCACAGCCAAACGGGTGGACAAGAAGCTGCAGCCTT
GGATTCAGGAACAGATTCCAGGTCCCTTCGAGCCAAAGGACGAGCCAAGG
GTAAACGTGTTCCTGGCCGACTTCGTAAGCCTAAAGGGCGGACAGTTCTG
CGATTGGGTAGTTGATCTGAACACAAAACTACTTGAGCAATTGGCTGGCG
ATAAGGAGCTGGAGTCCACTGAAGGCGTGGAAGAGGAGGAGGCCCAAGGT
GCAAGCTTTCTAGACCAT
BO25340.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:05:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10747-RB | 987 | CG10747-PB | 1..984 | 17..1000 | 4920 | 100 | Plus |
| CG10747-RA | 987 | CG10747-PA | 1..984 | 17..1000 | 4920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10747-RB | 1600 | CG10747-RB | 220..1214 | 16..1010 | 4930 | 99.7 | Plus |
| CG10747-RA | 1529 | CG10747-RA | 149..1143 | 16..1010 | 4930 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 20090022..20090941 | 1010..91 | 4555 | 99.7 | Minus |
| 2L | 23513712 | 2L | 20090996..20091074 | 94..16 | 395 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:05:20 has no hits.
BO25340.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:14 Download gff for
BO25340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 148..1131 | 17..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:53 Download gff for
BO25340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 150..1133 | 17..1002 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:27 Download gff for
BO25340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10747-RA | 150..1133 | 17..1002 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:27 Download gff for
BO25340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 20090029..20090939 | 93..1002 | 99 | <- | Minus |
| 2L | 20090998..20091073 | 17..92 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:53 Download gff for
BO25340.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 20090029..20090939 | 93..1002 | 99 | <- | Minus |
| arm_2L | 20090998..20091073 | 17..92 | 100 | | Minus |
BO25340.pep Sequence
Translation from 16 to 1018
> BO25340.pep
MSKDHWMRDLPSELRDLSIINLAIPGSHNSMTYGINSKSELSPDAEISIR
RWHRFFPCFVRRWSKTQSSGTLDQLELGVRYFDLRIAQKDDKFYYCHGLF
AMEIFEPLLEIRQFVDTHPEEVVILDLQHFYAMTVAHHQKLHKDLIQFFA
HRLYSTVDGSLKDCTLNRCLEMQRSVVIIYRRCPIPLPLRFWPSYAWPTP
WPNKASVKKLQSFLEDSLLSRQPQQGYVSQCLITPTGRYIAFRLFFTLKS
TAKRVDKKLQPWIQEQIPGPFEPKDEPRVNVFLADFVSLKGGQFCDWVVD
LNTKLLEQLAGDKELESTEGVEEEEAQGASFLDH
BO25340.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10747-PB | 328 | CG10747-PB | 1..328 | 1..328 | 1756 | 100 | Plus |
| CG10747-PA | 328 | CG10747-PA | 1..328 | 1..328 | 1756 | 100 | Plus |
