Clone BO25341 Report

Search the DGRC for BO25341

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:41
Vector:pDNR-Dual
Associated Gene/TranscriptCG9117-RA
Protein status:BO25341.pep: Imported from assembly
Sequenced Size:718

Clone Sequence Records

BO25341.complete Sequence

718 bp assembled on 2010-06-10

GenBank Submission: KX795300

> BO25341.complete
GAAGTTATCAGTCGACATGGCATACACTGATCCTGCGCAACGAAACCAGG
TGACCGTGCTCCAGGTCGGCTATTCTCGCCAAGAAGAAGGAGACGAGTCC
GCCATGCGGGCTAACTGCACATGCACACTGGTCCGCTGCCGGGATGGCAC
CAACATAATCGTGGACACACTGACGGCCTGGGATGGAGATCACCTGCGTT
CGTTGTTGGGCCAGCAGGGACTAGGCGTCGATGACATCCACGTGGTGGTC
TGCTCTCACGGACACTCTGACCACATCGGTTGCAACTATCTGTTTCAGAA
GGCACGAATGCATTTGGTCGGCGCATGTGCCTCACATCACGACCTCTACA
TGGACCACCTTGGTAGTGGTAATCCAGACGAGCAACTGGCCCTAGATTCG
AATGCCGAGGTGGTAGTGAGGCGGTCGCCAGGACACACCCTCAGCTGCGT
TTCAGTTCTTGTGGAAAATTCCCAGCTGGGTGGACGGGTCGGTATCACCG
GAGATCTCTTCGAGCGTCGCGAGGACATCGACGATGAGAACATTTGGATG
GACGCTGGAAGCGAAAACGAGAAGGTGCAGCGCGAGGAGCGCAGTAAAAT
GGCACAACTGTGCGAGTTTATAATCCCAGGACATGGTCCGATGTTTTCTG
TCACACAATCAATGCGCTGTAAACTTAAAGAAGACGCCACTTCTAACACT
GCAAGCTTTCTAGACCAT

BO25341.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-RA 687 CG9117-PA 1..684 17..700 3420 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:30
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-RA 906 CG9117-RA 88..771 17..700 3420 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6037132..6037815 700..17 3420 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:05:29 has no hits.

BO25341.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:15 Download gff for BO25341.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..771 17..702 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:57 Download gff for BO25341.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..771 17..702 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:30 Download gff for BO25341.complete
Subject Subject Range Query Range Percent Splice Strand
CG9117-RA 88..771 17..702 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:30 Download gff for BO25341.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6037130..6037815 17..702 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:57 Download gff for BO25341.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6037130..6037815 17..702 99   Minus

BO25341.pep Sequence

Translation from 16 to 718

> BO25341.pep
MAYTDPAQRNQVTVLQVGYSRQEEGDESAMRANCTCTLVRCRDGTNIIVD
TLTAWDGDHLRSLLGQQGLGVDDIHVVVCSHGHSDHIGCNYLFQKARMHL
VGACASHHDLYMDHLGSGNPDEQLALDSNAEVVVRRSPGHTLSCVSVLVE
NSQLGGRVGITGDLFERREDIDDENIWMDAGSENEKVQREERSKMAQLCE
FIIPGHGPMFSVTQSMRCKLKEDATSNTASFLDH

BO25341.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG9117-PA 228 CG9117-PA 1..228 1..228 1215 100 Plus