Clone BO25343 Report

Search the DGRC for BO25343

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG14453-RA
Protein status:BO25343.pep: Imported from assembly
Sequenced Size:433

Clone Sequence Records

BO25343.complete Sequence

433 bp assembled on 2010-06-10

GenBank Submission: KX795208

> BO25343.complete
GAAGTTATCAGTCGACATGCGATTCATATTTGTTCTGCTCTTGGCCCTTC
TCGGCTGCCTCCTGTTTGCCCAGCAGGGCTGCGAAGCTACGGGAACGAGC
ACTGAAAGCTCCTCGGATAGTACCAGCGCCTCGGACACCTCCACTACCGC
GTCCTCTTCCTCCGACACAACTGAAGCCTCAACGTCTTCCGACACCACCA
CAGTGGCCTCGTCTGCCACGACTACCACCACTTCTTCGTCCTCGTCCTCG
TCGTCGTCCTCCAGCGCGGCCGCCCGTCGTCGCAGGGCCGCCGCCCGTCG
TCGTCGCTTGGCCCGCCAACGGCGCAGGCGCCAACAGCGCCAAAGGCGCC
AACAGCGCCAAAGGCGCCGCCGCCAACAGCAGCGCAGAAGACGCCAGCAA
AGGCAGCGCAGTGGAGCAAGCTTTCTAGACCAT

BO25343.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:57:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-RA 402 CG14453-PA 1..399 17..415 1995 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-RA 566 CG14453-RA 20..418 17..415 1995 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:42
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22694102..22694500 17..415 1995 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:57:43 has no hits.

BO25343.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:11 Download gff for BO25343.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 8..406 17..417 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:25 Download gff for BO25343.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 20..418 17..417 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:37 Download gff for BO25343.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 20..418 17..417 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:37 Download gff for BO25343.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22694102..22694500 17..417 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:25 Download gff for BO25343.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22687202..22687600 17..417 99   Plus

BO25343.pep Sequence

Translation from 16 to 433

> BO25343.pep
MRFIFVLLLALLGCLLFAQQGCEATGTSTESSSDSTSASDTSTTASSSSD
TTEASTSSDTTTVASSATTTTTSSSSSSSSSSSAAARRRRAAARRRRLAR
QRRRRQQRQRRQQRQRRRRQQQRRRRQQRQRSGASFLDH

BO25343.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-PA 133 CG14453-PA 1..133 1..133 629 100 Plus
CG32453-PB 120 CG32453-PB 1..120 1..133 294 54.4 Plus
CG32453-PA 120 CG32453-PA 1..120 1..133 294 54.4 Plus
CG14454-PB 120 CG14454-PB 1..120 1..133 294 54.4 Plus
CG14454-PA 120 CG14454-PA 1..120 1..133 294 54.4 Plus