BO25348.complete Sequence
532 bp assembled on 2010-06-10
GenBank Submission: KX798964
> BO25348.complete
GAAGTTATCAGTCGACATGAAAATCCTCTCCCGTCTGGGTCGCCTGATGC
GCTACACGGTGGCCTACGCGGCAATCACACACTGCACCTTCGAGTACATT
GGCGATTTCGTCCTGTGCAAAGGACCCTCCATGGAGCCCACCCTGCACTC
GGACAACGTTCTTCTCACCGAGCGCTTGTCGAAACACTGGCGAACCTACC
AGCCCGGCGACATAGTCATCGCCATATCGCCCATCAAAGCCGATCAGTTC
ATTTGCAAGCGTATCGTGGCCGTTTCCGGTGATCAGGTGCTAATCCAGAA
GCCCATTCCCATTGAGGCGGAGTTTAGTGGTAATTCGGATGACAAGAAGA
AGCCCGTGATGGTCAAGGACTATGTGCCGCGCGGACACGTTTGGATTGAG
GGTGACAACAAGGGAAACAGCTCGGATTCCCGCTACTACGGACCCATTCC
GGTGGGCCTCATCCGGAGCCGCGTGCTCTGCCGCATCTGGCCGATATCCG
AGGCCACGGGTCTAGCAAGCTTTCTAGACCAT
BO25348.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:58:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9240-RA | 501 | CG9240-PA | 1..498 | 17..514 | 2490 | 100 | Plus |
| CG9240-RB | 387 | CG9240-PB | 1..384 | 131..514 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:58:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9240-RA | 907 | CG9240-RA | 169..670 | 13..514 | 2510 | 100 | Plus |
| CG9240-RB | 991 | CG9240-RB | 355..754 | 115..514 | 2000 | 100 | Plus |
| CG9240-RB | 991 | CG9240-RB | 169..271 | 13..115 | 515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:58:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15700409..15700812 | 514..111 | 2005 | 99.8 | Minus |
| X | 23542271 | X | 15700989..15701091 | 115..13 | 515 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:58:03 has no hits.
BO25348.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:16 Download gff for
BO25348.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9240-RA | 291..788 | 17..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:34 Download gff for
BO25348.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9240-RA | 173..670 | 17..516 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:44 Download gff for
BO25348.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9240-RA | 173..670 | 17..516 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:44 Download gff for
BO25348.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15700407..15700807 | 116..516 | 99 | <- | Minus |
| X | 15700989..15701087 | 17..115 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:34 Download gff for
BO25348.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15594440..15594840 | 116..516 | 99 | <- | Minus |
| arm_X | 15595022..15595120 | 17..115 | 100 | | Minus |
BO25348.pep Sequence
Translation from 16 to 532
> BO25348.pep
MKILSRLGRLMRYTVAYAAITHCTFEYIGDFVLCKGPSMEPTLHSDNVLL
TERLSKHWRTYQPGDIVIAISPIKADQFICKRIVAVSGDQVLIQKPIPIE
AEFSGNSDDKKKPVMVKDYVPRGHVWIEGDNKGNSSDSRYYGPIPVGLIR
SRVLCRIWPISEATGLASFLDH
BO25348.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9240-PA | 166 | CG9240-PA | 1..166 | 1..166 | 879 | 100 | Plus |
| CG9240-PB | 128 | CG9240-PB | 1..128 | 39..166 | 678 | 100 | Plus |
| CG11110-PA | 171 | CG11110-PA | 4..142 | 9..159 | 169 | 33.1 | Plus |
