BO25354.complete Sequence
487 bp assembled on 2010-06-10
GenBank Submission: KX796575
> BO25354.complete
GAAGTTATCAGTCGACATGAAAACACTGGAGAAATATATCCTATTCGCCA
TCGTGCTCTGCTGCCTGCTGCAATTGGGCCAGGCGATCAAATGTTGGGAC
TGTCGCAGCGATAACGATCCCAAATGCGGGGATCCTTTTGACAACAGCAC
GCTGGCCATCACCGATTGCCAACAGGCGCCGGAGCTGGAGCATCTGAAGG
GCGTGCGACCGACAATGTGTCGCAAGATCCGGCAGAAGGTGCACGGTGAA
TGGCGCTACTTTCGCAGCTGCGCCTACATGGGCGAGCCGGGCATCGAGGG
CGACGAACGCTTCTGCCTGATGCGCACTGGCAGCTACAACATCTTCATGG
AGTTCTGCACGTGCAACAGCAAGGACGGCTGCAACTCGGCGGGCATCCAT
AGGCTAGGACTGATGGGCGTCCTAACTGGCACACTGCTCTCGGTGATTGT
GGCTCATCTTCTGCGGCAAGCAAGCTTTCTAGACCAT
BO25354.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-RA | 456 | CG17218-PA | 1..453 | 17..469 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-RA | 1033 | CG17218-RA | 90..542 | 17..469 | 2265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12173208..12173600 | 77..469 | 1965 | 100 | Plus |
2L | 23513712 | 2L | 12173070..12173131 | 17..78 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:59:33 has no hits.
BO25354.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:22 Download gff for
BO25354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17218-RA | 87..539 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:16 Download gff for
BO25354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
crok-RA | 90..542 | 17..471 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:16 Download gff for
BO25354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
crok-RA | 90..542 | 17..471 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:16 Download gff for
BO25354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12173070..12173130 | 17..77 | 100 | -> | Plus |
2L | 12173209..12173600 | 78..471 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:16 Download gff for
BO25354.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12173070..12173130 | 17..77 | 100 | -> | Plus |
arm_2L | 12173209..12173600 | 78..471 | 99 | | Plus |
BO25354.pep Sequence
Translation from 16 to 487
> BO25354.pep
MKTLEKYILFAIVLCCLLQLGQAIKCWDCRSDNDPKCGDPFDNSTLAITD
CQQAPELEHLKGVRPTMCRKIRQKVHGEWRYFRSCAYMGEPGIEGDERFC
LMRTGSYNIFMEFCTCNSKDGCNSAGIHRLGLMGVLTGTLLSVIVAHLLR
QASFLDH
BO25354.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-PA | 151 | CG17218-PA | 1..151 | 1..151 | 831 | 100 | Plus |
CG6329-PF | 155 | CG6329-PF | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PE | 155 | CG6329-PE | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PD | 155 | CG6329-PD | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PB | 155 | CG6329-PB | 5..122 | 4..125 | 255 | 39.8 | Plus |