Clone BO25357 Report

Search the DGRC for BO25357

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:57
Vector:pDNR-Dual
Associated Gene/TranscriptCG13339-RA
Protein status:BO25357.pep: Imported from assembly
Sequenced Size:490

Clone Sequence Records

BO25357.complete Sequence

490 bp assembled on 2010-06-10

GenBank Submission: KX796175

> BO25357.complete
GAAGTTATCAGTCGACATGGCAGAAACCACTGGTGTGCAAATAAAACTGG
AACAGCAAAACATCAAGGAGCGCCTGAATCTGCACGTCAAGCGGCGCCTG
CAGCAGGATGCGGATAATCCCGCCGAGAGTCCCGAATTGCTGCCCACCGA
TGCGAATGCCAAGCGCAGCAAGACGAAAGATGTCTCAAAACCAAGAAAAC
CCTACCAAAAACGGACAGAAAAACCGAAAACAGAGGCGACCAAGTGCAAG
AAAGTTGGACAATTGGGCAGTCCGGCGGGTGAAGTGGATCCAATGGATGA
CCAGGAGACGGAAGGCTTTTCCCCGGAGGCGCCGGATGGCAAATCCGCCA
GACGGGATTGCTGCAAAAATGCCGACATCCTCAACATAGTTTTGAACGCT
AAGAAACGTAGTTTAATGCAGGATCCTGAAGTTCAGGCCTTCTGGACCGA
AATAACCAATTGCATAAAGGGCGCAAGCTTTCTAGACCAT

BO25357.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:59:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-RA 459 CG13339-PA 1..456 17..472 2280 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:59:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-RA 662 CG13339-RA 61..518 15..472 2290 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:59:49
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 13824918..13825157 15..254 1200 100 Plus
2R 25286936 2R 13825209..13825428 253..472 1100 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:59:50 has no hits.

BO25357.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:24 Download gff for BO25357.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 29..484 17..474 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:24 Download gff for BO25357.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 63..518 17..474 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:22 Download gff for BO25357.complete
Subject Subject Range Query Range Percent Splice Strand
CG13339-RA 63..518 17..474 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:22 Download gff for BO25357.complete
Subject Subject Range Query Range Percent Splice Strand
2R 13825211..13825428 255..474 99   Plus
2R 13824920..13825157 17..254 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:24 Download gff for BO25357.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 9712425..9712662 17..254 100 -> Plus
arm_2R 9712716..9712933 255..474 99   Plus

BO25357.pep Sequence

Translation from 16 to 490

> BO25357.pep
MAETTGVQIKLEQQNIKERLNLHVKRRLQQDADNPAESPELLPTDANAKR
SKTKDVSKPRKPYQKRTEKPKTEATKCKKVGQLGSPAGEVDPMDDQETEG
FSPEAPDGKSARRDCCKNADILNIVLNAKKRSLMQDPEVQAFWTEITNCI
KGASFLDH

BO25357.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:17
Subject Length Description Subject Range Query Range Score Percent Strand
CG13339-PA 152 CG13339-PA 1..152 1..152 795 100 Plus