BO25358.complete Sequence
478 bp assembled on 2010-06-10
GenBank Submission: KX797895
> BO25358.complete
GAAGTTATCAGTCGACATGGTGTCCGCTCTGAAATGCAGTTTGGCCGTGG
CCGTTATGATCAGTCTGGCTTGTTCGGCCTACGCCATCAAGTGCTACCAG
TGCGAGTCCCTCACAATGCCCAAGTGTGGCCTGAAGTTCGAGGCTGATGA
GACGTTGCTGCTGGACTGCTCCAGGATCGGACCCCCACGCTACCTGCAGA
ACTTCTTCCCCCTGCGGAACGCCACTGGTTGCATGAAGAAGACCCTCGAA
AGCGTGGCCGGACATCCGCAGATCGTGAGGAGCTGCTACTTCGGGGACAT
CAACAATATCCAAGCTGGCTGCCAGTCGGATCCCTCTATGCCGTTCGTTA
AGCAGCTGGGCTGCGATGTCTGCACCAAGGACGAGTGCAACGGATCCTCC
TCCCTGGCCCCCATCGCCGGAGCCATCCTGCTCTTCTTCGGCGTGGCTCG
TCTGCTGGCCGCAAGCTTTCTAGACCAT
BO25358.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9336-RA | 447 | CG9336-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
CG9336-RB | 348 | CG9336-PB | 1..345 | 116..460 | 1725 | 100 | Plus |
CG9338-RB | 444 | CG9338-PB | 146..441 | 162..460 | 425 | 76.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9336-RA | 678 | CG9336-RA | 108..551 | 17..460 | 2220 | 100 | Plus |
CG9336-RB | 636 | CG9336-RB | 126..509 | 77..460 | 1920 | 100 | Plus |
CG9338-RB | 1087 | CG9338-RB | 224..519 | 162..460 | 425 | 76.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 20860681..20860887 | 254..460 | 1035 | 100 | Plus |
2L | 23513712 | 2L | 20859724..20859901 | 77..254 | 890 | 100 | Plus |
2L | 23513712 | 2L | 20866947..20867141 | 266..460 | 345 | 78.5 | Plus |
2L | 23513712 | 2L | 20859273..20859333 | 17..77 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 03:00:02 has no hits.
BO25358.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:25 Download gff for
BO25358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9336-RA | 105..548 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:30 Download gff for
BO25358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9336-RA | 108..551 | 17..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:26 Download gff for
BO25358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9336-RA | 108..551 | 17..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:26 Download gff for
BO25358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 20859273..20859333 | 17..77 | 100 | -> | Plus |
2L | 20859725..20859901 | 78..254 | 100 | -> | Plus |
2L | 20860682..20860887 | 255..462 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:30 Download gff for
BO25358.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 20859273..20859333 | 17..77 | 100 | -> | Plus |
arm_2L | 20859725..20859901 | 78..254 | 100 | -> | Plus |
arm_2L | 20860682..20860887 | 255..462 | 99 | | Plus |
BO25358.pep Sequence
Translation from 16 to 478
> BO25358.pep
MVSALKCSLAVAVMISLACSAYAIKCYQCESLTMPKCGLKFEADETLLLD
CSRIGPPRYLQNFFPLRNATGCMKKTLESVAGHPQIVRSCYFGDINNIQA
GCQSDPSMPFVKQLGCDVCTKDECNGSSSLAPIAGAILLFFGVARLLAAS
FLDH
BO25358.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:05:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9336-PA | 148 | CG9336-PA | 1..148 | 1..148 | 782 | 100 | Plus |
CG9336-PB | 115 | CG9336-PB | 1..115 | 34..148 | 617 | 100 | Plus |
CG9338-PB | 147 | CG9338-PB | 1..147 | 1..148 | 524 | 62.8 | Plus |
CG9338-PA | 147 | CG9338-PA | 1..147 | 1..148 | 524 | 62.8 | Plus |
CG31675-PA | 148 | CG31675-PA | 6..148 | 9..147 | 267 | 40.3 | Plus |