BO25360.complete Sequence
367 bp assembled on 2010-06-10
GenBank Submission: KX795820
> BO25360.complete
GAAGTTATCAGTCGACATGGCCAAACATCATCCGGATTTGATTTTCTGCC
GCAAGCAGCCCGGCGTGGCCATTGGACGCCTGTGTGAAAAAGACGATGGA
AAGTGTGTGATCTGCGACTCCTACGTGCGGCCATGCACACTGGTGCGGAT
CTGCGACGAGTGCAACTACGGATCCTACCAGGGCAGGTGCGTCATCTGTG
GAGGACCCGGAGTGTCGGATGCCTACTACTGCAAGTCCTGCACCATTCAG
GAAAAGGACCGCGACGGATGCCCCAAGATTGTAAATCTAGGCAGCTCCAA
GACTGACCTGTTCTACGAACGCAAGAAATATGGCTTCAAACAGAACTATG
CAAGCTTTCTAGACCAT
BO25360.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-RA | 336 | CG9548-PA | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-RA | 483 | CG9548-RA | 86..419 | 16..349 | 1670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6490439..6490630 | 259..68 | 960 | 100 | Minus |
2L | 23513712 | 2L | 6490288..6490373 | 345..260 | 430 | 100 | Minus |
2L | 23513712 | 2L | 6490706..6490758 | 68..16 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:10 has no hits.
BO25360.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:27 Download gff for
BO25360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 72..404 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:35 Download gff for
BO25360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 87..419 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:28 Download gff for
BO25360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9548-RA | 87..419 | 17..351 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:28 Download gff for
BO25360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6490280..6490373 | 260..351 | 95 | <- | Minus |
2L | 6490439..6490629 | 69..259 | 100 | <- | Minus |
2L | 6490706..6490757 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:35 Download gff for
BO25360.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6490280..6490373 | 260..351 | 95 | <- | Minus |
arm_2L | 6490439..6490629 | 69..259 | 100 | <- | Minus |
arm_2L | 6490706..6490757 | 17..68 | 100 | | Minus |
BO25360.pep Sequence
Translation from 16 to 367
> BO25360.pep
MAKHHPDLIFCRKQPGVAIGRLCEKDDGKCVICDSYVRPCTLVRICDECN
YGSYQGRCVICGGPGVSDAYYCKSCTIQEKDRDGCPKIVNLGSSKTDLFY
ERKKYGFKQNYASFLDH
BO25360.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9548-PA | 111 | CG9548-PA | 1..111 | 1..111 | 633 | 100 | Plus |