BO25362.complete Sequence
1285 bp assembled on 2010-06-10
GenBank Submission: KX794154
> BO25362.complete
GAAGTTATCAGTCGACATGTCATGTATTCGGCTAGCGTCTGCCACCGTTC
TGGCAGGGGTCCGTCCCCCGCCGGCAGCAAGCGGAGGTGGAGCCTTGCGC
CTGTTGACTAAACGGAATCCGGATGCTGCATTCGCACGCCGCCAGTTTGC
TGTAGCGGTTGAAAACGGCGGAGGCAGAAAGAAGCCGAATGGAACTTTCA
AGCTCGCAGTTTTGGGGGCCACCGTAGGCGCGGCCACCGGATCGGTGTAT
ACGATGTACCAGCGGTGGACAGACGGCAGCTCGCACAAAGAGCACGAGGA
GACGAAGCCGACGCGGCTGGACGGGATTCCGGCTGGAGTGCGGATAACCA
AGCGCTATGTCAACCCCAAGGACACGTCCGGTTTGGACATTGTGCTGTTC
CAGTTCCAGACGTGTCCCTTCTGTTGCAAGGTGCGCGCTTTCCTCGACTA
CATGGGCATATCCTATGCGGTGGTCGAAGTGGATGCCGTCCTACGGCAGG
ACATCCGCTGGTCGTCGGTGAAGAAGGTGCCGATGGTGCTCATCCGACAG
CAGGACGGCAAATACGTCCAGATGGTGGACTCAAGTGCCATCATATCCCT
TATAGCCACCCACCTGCAGGACAAGCGCACCGACATCGGCGAGCTGGCAC
AGTTCTATCCGCACACCTCCTTCTTCGACGATGATGGCAAAAAGAAGAAC
GACATATTGAATAAATACTTCCTCATGTACCGCGAGCATACGCCCAAGGG
AGTATCCAAGGAAACGGATGAAACCGATCGCAAGTGGAGAAGCTGGGCCG
ACAGCCACTTGGTGCATCTAATATCGCCCAACTGTTATCAGACCATGGGC
GAGTCCCTAGAGACTTTTGAGTGGTTCTCGCAAGCTGGCGAGTGGGACGT
TCACTTCCCCAAATGGGAGCGCGACCTGATGGTTTACTGTGGTGCCACCG
CCATGTGGGCCATAGCCAAGATGCTGAAGCGCCGTCACGCCCTCAGCGAC
GACGTCAGGTCGCACATGTACGATGCCCTTGACCAGTGGACCACTGAGCT
GAAAAAGAGGAACACGAAATTCATGGGCGGAAAACAGCCAAGTCTGGCTG
ATCTATCGGTTTTCGGCGTGCTTTCAAGCATGGAGGGGTGTCAGACGTTC
AAGGATTGTCTGCAAAACACCAGCATCGGTAAATGGTTTTATGACGTCAA
GGCGTTGGTGGAGAAGAATCGTGGGCAGTTGCAAAGAGAACGTATTGAAA
ACATGGCCGCTATAGCTGCAAGCTTTCTAGACCAT
BO25362.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(P)-RA | 1254 | CG4086-PA | 1..1251 | 17..1267 | 6255 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(P)-RA | 1412 | CG4086-RA | 83..1333 | 17..1267 | 6255 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16611363..16612117 | 771..17 | 3775 | 100 | Minus |
| 3L | 28110227 | 3L | 16610886..16611298 | 1184..772 | 2065 | 100 | Minus |
| 3L | 28110227 | 3L | 16610741..16610830 | 1267..1178 | 450 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:35 has no hits.
BO25362.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:30 Download gff for
BO25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 81..1331 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:47 Download gff for
BO25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 83..1333 | 17..1269 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:37 Download gff for
BO25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Su(P)-RA | 83..1333 | 17..1269 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:37 Download gff for
BO25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16610739..16610829 | 1179..1269 | 97 | <- | Minus |
| 3L | 16610892..16611298 | 772..1178 | 100 | <- | Minus |
| 3L | 16611363..16612117 | 17..771 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:47 Download gff for
BO25362.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16603839..16603929 | 1179..1269 | 97 | <- | Minus |
| arm_3L | 16603992..16604398 | 772..1178 | 100 | <- | Minus |
| arm_3L | 16604463..16605217 | 17..771 | 100 | | Minus |
BO25362.pep Sequence
Translation from 16 to 1285
> BO25362.pep
MSCIRLASATVLAGVRPPPAASGGGALRLLTKRNPDAAFARRQFAVAVEN
GGGRKKPNGTFKLAVLGATVGAATGSVYTMYQRWTDGSSHKEHEETKPTR
LDGIPAGVRITKRYVNPKDTSGLDIVLFQFQTCPFCCKVRAFLDYMGISY
AVVEVDAVLRQDIRWSSVKKVPMVLIRQQDGKYVQMVDSSAIISLIATHL
QDKRTDIGELAQFYPHTSFFDDDGKKKNDILNKYFLMYREHTPKGVSKET
DETDRKWRSWADSHLVHLISPNCYQTMGESLETFEWFSQAGEWDVHFPKW
ERDLMVYCGATAMWAIAKMLKRRHALSDDVRSHMYDALDQWTTELKKRNT
KFMGGKQPSLADLSVFGVLSSMEGCQTFKDCLQNTSIGKWFYDVKALVEK
NRGQLQRERIENMAAIAASFLDH
BO25362.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Su(P)-PA | 417 | CG4086-PA | 1..417 | 1..417 | 2209 | 100 | Plus |
