BO25365.complete Sequence
319 bp assembled on 2010-06-10
GenBank Submission: KX796136
> BO25365.complete
GAAGTTATCAGTCGACATGAGTTCCAAGTCCCTTTTCGACAGCGAGGAGG
ATGCCGCTCAGGCCAACAAATTATCCAGGAAAGCAAAGGAATCGCCCTTC
ATGCTTGTGGGTATTACCGGATTCGTGGCCGCCGGATTGATTGGAGCGTA
CAAGTACCGGAACCGCGGAACGATGAGCACCAGCGTCTTCCTGATGCAGC
TGCGAGTCGCCGCCCAGGGAACCGTCGTCGGATGTCTGACCCTCGGACTG
GCCTACAGCATGGCCAAGGAGTACCTGTTCGACAAGGCGCCCAAGGAAAA
GGCAAGCTTTCTAGACCAT
BO25365.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:00:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-RB | 288 | CG17734-PB | 1..285 | 17..301 | 1425 | 100 | Plus |
CG17734-RA | 306 | CG17734-PA | 1..284 | 17..300 | 1420 | 100 | Plus |
CG11825-RC | 411 | CG11825-PC | 109..379 | 17..287 | 695 | 83.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-RB | 1024 | CG17734-RB | 125..409 | 17..301 | 1425 | 100 | Plus |
CG17734-RA | 764 | CG17734-RA | 125..408 | 17..300 | 1420 | 100 | Plus |
CG17734-RC | 1317 | CG17734-RC | 511..702 | 110..301 | 960 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 11242823..11243014 | 301..110 | 960 | 100 | Minus |
2R | 25286936 | 2R | 10420733..10421003 | 287..17 | 695 | 83.8 | Minus |
3R | 32079331 | 3R | 11243780..11243875 | 112..17 | 480 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:00:52 has no hits.
BO25365.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:33 Download gff for
BO25365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17734-RB | 102..386 | 17..303 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:32:56 Download gff for
BO25365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17734-RB | 125..409 | 17..303 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:40:44 Download gff for
BO25365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17734-RB | 125..409 | 17..303 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:40:44 Download gff for
BO25365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 11242821..11243013 | 111..303 | 98 | <- | Minus |
3R | 11243782..11243875 | 17..110 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:32:56 Download gff for
BO25365.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 7068543..7068735 | 111..303 | 98 | <- | Minus |
arm_3R | 7069504..7069597 | 17..110 | 100 | | Minus |
BO25365.pep Sequence
Translation from 16 to 319
> BO25365.pep
MSSKSLFDSEEDAAQANKLSRKAKESPFMLVGITGFVAAGLIGAYKYRNR
GTMSTSVFLMQLRVAAQGTVVGCLTLGLAYSMAKEYLFDKAPKEKASFLD
H
BO25365.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:35:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17734-PB | 95 | CG17734-PB | 1..95 | 1..95 | 470 | 100 | Plus |
CG17734-PA | 101 | CG17734-PA | 1..99 | 1..99 | 467 | 96 | Plus |
CG11825-PA | 100 | CG11825-PA | 1..93 | 1..93 | 398 | 84.9 | Plus |
CG11825-PC | 136 | CG11825-PC | 37..129 | 1..93 | 398 | 84.9 | Plus |
CG11825-PD | 72 | CG11825-PD | 1..65 | 29..93 | 286 | 87.7 | Plus |