BO25369.complete Sequence
973 bp assembled on 2010-06-10
GenBank Submission: KX796864
> BO25369.complete
GAAGTTATCAGTCGACATGTCGGAGGCCTATTCGAATTCCATACGCAGCC
TGAGTCCAGAGCTGGCCAAAAAGGCGCACGACGAGCTGGGAGAGATACCC
GACAGAATCGATGAGGATATCGAAACGTTGCGCACTTGGATCTCCAAGCA
ACCTCATCTCAAGGCTCGCCAGGATGCCCAGTTCCTGGTCGCCTTCCTGC
GTGGCTGCAAATACAGCTTGGAGAAAACCAAACTCAAGTTGGACAACTTC
TATGCGATGAGGGGAGCCGTGCCCGAGCTCTACAAGAATCGCATTGTGGG
TGAGAAGCAGCTCAGCATTCTGGACACAGGTTGCCTCCTCCGATTGCCGC
AGCCACTGCAGGCTGATGGTCCTCGCATCCACATCTCCCGCTACGGTCAA
TACGACTCGAAGAAGTACTCCATTGCCGAGGTTGTCCAGGTAAACACGAT
GCTCGGCGAGATTCAGATAAGGGAAGACGACAATGCTATGATATCCGGCT
TTGTGGAGATCATCGACATGAAGGGCGTTGGGGCAGGTCACCTATTCCAG
TTCGACGCGGTGCTGGTCAAGAAACTGGCCGTTTTGGGCGACAAAGCGTA
TCCCTACAGGCCCAAGGGTTTTCACTTTGTAAATGCGCCCTCCAGTGCAG
AGAAGTTCATGTCCATTGCCAAGAGCCTGATGAGCGAAAAGATTCGGAAA
CGGTTTCATATACACTCCAAACTGGACAGTCTCTACAAGTATGTGCCCAA
GGAATGCTTGCCAGCTGAGTATGGGGGCAGCAATGGAACCATCCAGGACG
TCGTCAGTACATGGAGGACCAAGCTCCTGGCCTACAAGCCATTCTTTGAG
GAGGAGGCTTCTTATGGCACGAATGAAAAGCTACGGCGAGGACAGCCCGT
TAGCGCCGAATCACTTTTTGGAATCGAAGGATCCTTCAGAAAACTAGACA
TCGACGCAAGCTTTCTAGACCAT
BO25369.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:01:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12926-RA | 942 | CG12926-PA | 1..939 | 17..955 | 4695 | 100 | Plus |
| CG30339-RA | 927 | CG30339-PA | 113..222 | 144..253 | 235 | 80.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12926-RA | 1347 | CG12926-RA | 185..1123 | 17..955 | 4695 | 100 | Plus |
| CG30339-RA | 1023 | CG30339-RA | 154..263 | 144..253 | 235 | 80.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9608665..9609038 | 703..330 | 1870 | 100 | Minus |
| 2R | 25286936 | 2R | 9609096..9609409 | 330..17 | 1570 | 100 | Minus |
| 2R | 25286936 | 2R | 9608352..9608604 | 955..703 | 1265 | 100 | Minus |
| 2R | 25286936 | 2R | 9602639..9602748 | 253..144 | 235 | 80.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:01:35 has no hits.
BO25369.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:38 Download gff for
BO25369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12926-RA | 179..1117 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:17 Download gff for
BO25369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12926-RA | 185..1123 | 17..957 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:02 Download gff for
BO25369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12926-RA | 185..1123 | 17..957 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:02 Download gff for
BO25369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9608350..9608603 | 704..957 | 99 | <- | Minus |
| 2R | 9608665..9609037 | 331..703 | 100 | <- | Minus |
| 2R | 9609096..9609409 | 17..330 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:17 Download gff for
BO25369.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5495855..5496108 | 704..957 | 99 | <- | Minus |
| arm_2R | 5496170..5496542 | 331..703 | 100 | <- | Minus |
| arm_2R | 5496601..5496914 | 17..330 | 100 | | Minus |
BO25369.pep Sequence
Translation from 16 to 973
> BO25369.pep
MSEAYSNSIRSLSPELAKKAHDELGEIPDRIDEDIETLRTWISKQPHLKA
RQDAQFLVAFLRGCKYSLEKTKLKLDNFYAMRGAVPELYKNRIVGEKQLS
ILDTGCLLRLPQPLQADGPRIHISRYGQYDSKKYSIAEVVQVNTMLGEIQ
IREDDNAMISGFVEIIDMKGVGAGHLFQFDAVLVKKLAVLGDKAYPYRPK
GFHFVNAPSSAEKFMSIAKSLMSEKIRKRFHIHSKLDSLYKYVPKECLPA
EYGGSNGTIQDVVSTWRTKLLAYKPFFEEEASYGTNEKLRRGQPVSAESL
FGIEGSFRKLDIDASFLDH
BO25369.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12926-PA | 313 | CG12926-PA | 1..313 | 1..313 | 1612 | 100 | Plus |
| CG30339-PA | 308 | CG30339-PA | 3..308 | 8..313 | 795 | 46.7 | Plus |
| CG33966-PA | 310 | CG33966-PA | 3..310 | 8..313 | 766 | 46.1 | Plus |
| CG33514-PA | 311 | CG33514-PA | 2..311 | 6..313 | 706 | 45.2 | Plus |
| CG33965-PA | 317 | CG33965-PA | 1..317 | 1..313 | 660 | 42 | Plus |
