BO25370.complete Sequence
490 bp assembled on 2010-06-10
GenBank Submission: KX795703
> BO25370.complete
GAAGTTATCAGTCGACATGCTCGAGAACTGTCAGCGTCACCACATGCTCC
TTGGACTAGGAGCCCTAACGATGGTCACCATACTCGTCCTGTTCGTGGAA
TCTCGTTACGCGGCAGATGGTCCTCGTCGCCGAGAGCCGCAATTCGTGAT
CGAGGACAACTCGACCTGCTGGCGGAATGAGAAGTACACGATGGTGCAGG
AGTGCCACCCGTGCTCCGAATTCGATATAGTCAGCCGGAGCTTGGGCGTC
TGCATTCACACGCACTACAAGGAGGTGCTGCGCTGCCAGAGCGGCGAGAT
CGTAACCAGGAGCTGCGACCGGGTGGCGCTCATCGAGCAAATGAACTTCT
TGAAATTTGAGGTCTCGTGCTTTGTAATCGGATTACTTAGCTACCTGGTC
AGTTATGCCCGCGATCGAGTCCTGTCCAGGCGCAACTACATGAGAATCGA
GCGACAGCTAAACCGGGTCCAAGCAAGCTTTCTAGACCAT
BO25370.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:01:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
JTBR-RC | 459 | CG1935-PC | 1..456 | 17..472 | 2280 | 100 | Plus |
JTBR-RB | 459 | CG1935-PB | 1..456 | 17..472 | 2280 | 100 | Plus |
JTBR-RA | 459 | CG1935-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
JTBR-RC | 799 | CG1935-RC | 114..569 | 17..472 | 2280 | 100 | Plus |
JTBR-RB | 789 | CG1935-RB | 104..559 | 17..472 | 2280 | 100 | Plus |
JTBR-RA | 849 | CG1935-RA | 164..619 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 1802238..1802693 | 472..17 | 2280 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:01:45 has no hits.
BO25370.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:39 Download gff for
BO25370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
JTBR-RA | 143..598 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:20 Download gff for
BO25370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
JTBR-RA | 164..619 | 17..474 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:04 Download gff for
BO25370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
JTBR-RA | 164..619 | 17..474 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:04 Download gff for
BO25370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 1802234..1802693 | 17..474 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:20 Download gff for
BO25370.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 1802234..1802693 | 17..474 | 99 | | Minus |
BO25370.pep Sequence
Translation from 16 to 490
> BO25370.pep
MLENCQRHHMLLGLGALTMVTILVLFVESRYAADGPRRREPQFVIEDNST
CWRNEKYTMVQECHPCSEFDIVSRSLGVCIHTHYKEVLRCQSGEIVTRSC
DRVALIEQMNFLKFEVSCFVIGLLSYLVSYARDRVLSRRNYMRIERQLNR
VQASFLDH
BO25370.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
JTBR-PC | 152 | CG1935-PC | 1..152 | 1..152 | 799 | 100 | Plus |
JTBR-PB | 152 | CG1935-PB | 1..152 | 1..152 | 799 | 100 | Plus |
JTBR-PA | 152 | CG1935-PA | 1..152 | 1..152 | 799 | 100 | Plus |