BO25372.complete Sequence
994 bp assembled on 2010-06-10
GenBank Submission: KX795956
> BO25372.complete
GAAGTTATCAGTCGACATGTCGAAAGTGACGCAAAGTGCTGACAACGGCA
GCAACGCCAACAGCAATGACATCTACAACATTGTCCTGCTGGTGGTTGAC
ATCGTGATGCTGATCGTCAAATTCTGGCTCGCCATTGCGGAAGCTATCGT
TGGACTTTTCCGCGCGCCGCCGCTCGATGATGTCAATGGCAAGGTGGTCC
TGATCACCGGCACTGGCCACGGCATGGGCAAGGAGATGGCACTGCAGTAC
GCCAAGCTGGGCGCCACCATTCTCTGCTGGGATGTCAATGAGCAGACCAA
TAACCAGACCGTCAAGGAGATCAAGAACAATGGTGGCAAGGCCTTTGGCT
ACGTTTGCAATGTGACCAAGCGCGAGGAACTGATCGAACTGGCCCAGAAG
GTGCGCAAGGAGCATGGATTCATTCATGTGGTGGTCAACAATGCCGGCAT
CATGCCCTGCCATCCACTGCTGGAGCATACCGAGAACGAGATTCGTCTAA
TGTACGAGATCAATGTGCTCTCTCACTTCTGGATCATCCAGGCGTTCCTG
CCCGATATGATTGAGCGCAACGAGGGCAGCATTGTGGCCCTATCCTCATG
CGCCGGACTCTTTGGACTGATCAATCTGGTGCCCTATTGCGGCACCAAGT
TCGCCGTTCGTGGCTACATGGCCGCCCTCGTTGAGGAGCTGCGTCAGAAG
AACCCACAGAACAACGTCAAGCTGACTACCATATATCCGTATATGATCGA
TACGGGTCTGTGCAAGAATCCCCGCTACCGATTCCCCAATCTGTTCAAGC
TGATACCCGCCGATGTGGCCGCCGGATCGATCATCGAGGCTCAGCGCCAG
GGATTGGAGGAGGCGGCGATTCCACGACATTTCGTGGCCGCTGAGAAGAT
CGGTCGCCTGATTCCACGCAAGGCGATGCGATTGGTCAACGATTTCTTCG
ACACGGGTGTGGATACCGATAAGTCCGCAAGCTTTCTAGACCAT
BO25372.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:05:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2254-RA | 963 | CG2254-PA | 1..960 | 17..976 | 4800 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:05:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2254-RA | 1404 | CG2254-RA | 155..1116 | 15..976 | 4810 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:05:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8079427..8079924 | 532..35 | 2490 | 100 | Minus |
| X | 23542271 | X | 8078638..8078898 | 976..716 | 1305 | 100 | Minus |
| X | 23542271 | X | 8079168..8079353 | 717..532 | 930 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:05:55 has no hits.
BO25372.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:34 Download gff for
BO25372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2254-RA | 154..1113 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:10 Download gff for
BO25372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2254-RA | 157..1116 | 17..978 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:43 Download gff for
BO25372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2254-RA | 157..1116 | 17..978 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:43 Download gff for
BO25372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8078636..8078898 | 716..978 | 99 | <- | Minus |
| X | 8079170..8079352 | 533..715 | 100 | <- | Minus |
| X | 8079427..8079922 | 37..532 | 100 | <- | Minus |
| X | 8081430..8081449 | 17..36 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:10 Download gff for
BO25372.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 7972669..7972931 | 716..978 | 99 | <- | Minus |
| arm_X | 7973203..7973385 | 533..715 | 100 | <- | Minus |
| arm_X | 7973460..7973955 | 37..532 | 100 | <- | Minus |
| arm_X | 7975463..7975482 | 17..36 | 100 | | Minus |
BO25372.pep Sequence
Translation from 16 to 994
> BO25372.pep
MSKVTQSADNGSNANSNDIYNIVLLVVDIVMLIVKFWLAIAEAIVGLFRA
PPLDDVNGKVVLITGTGHGMGKEMALQYAKLGATILCWDVNEQTNNQTVK
EIKNNGGKAFGYVCNVTKREELIELAQKVRKEHGFIHVVVNNAGIMPCHP
LLEHTENEIRLMYEINVLSHFWIIQAFLPDMIERNEGSIVALSSCAGLFG
LINLVPYCGTKFAVRGYMAALVEELRQKNPQNNVKLTTIYPYMIDTGLCK
NPRYRFPNLFKLIPADVAAGSIIEAQRQGLEEAAIPRHFVAAEKIGRLIP
RKAMRLVNDFFDTGVDTDKSASFLDH
BO25372.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2254-PA | 320 | CG2254-PA | 1..320 | 1..320 | 1658 | 100 | Plus |
| CG14946-PE | 318 | CG14946-PE | 13..316 | 16..318 | 684 | 44.1 | Plus |
| CG14946-PC | 318 | CG14946-PC | 13..316 | 16..318 | 684 | 44.1 | Plus |
| CG14946-PD | 318 | CG14946-PD | 13..316 | 16..318 | 684 | 44.1 | Plus |
| CG15629-PA | 325 | CG15629-PA | 17..297 | 22..302 | 390 | 31.2 | Plus |
