Clone BO25377 Report

Search the DGRC for BO25377

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:253
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG8152-RA
Protein status:BO25377.pep: Imported from assembly
Sequenced Size:1042

Clone Sequence Records

BO25377.complete Sequence

1042 bp assembled on 2010-06-10

GenBank Submission: KX797337

> BO25377.complete
GAAGTTATCAGTCGACATGAATTCTCAAAACGAATTGCATCCAAATTGGC
TGGCTCTAACAACATTGCCACTCCAACTGAAGCGATTCGTCCGAGCAGGA
GATCCGGATTTTATCGCCGAGTCCCCGAAAGCAGTAAAGCACCAAATCGA
TGGCTTAAACGGAGCAGAAGCTCGTGAGTTCTACAAGGAGGTGTTGGATG
CGCCCACAACCTGCCAACCTAACCTTCCAAGTACCCACAAAACTGCACAA
ACAAGAAGAGAGCCAGAAAGGATCCTAGTCCCCTTCGACAAAAGCAAATT
TTTCCGTTTGGCCACTAGCAACAAAGTAGAGGAGCTGTCTCAAATGAAGG
CCTCAGAAGAGGATTTAAATTCTCGGGATTCCTTTGGCTGGACTGCCTTG
ATGATGGCTGCCTGTGAAGGAGCCACGGAGGCAGTGAGTTGGCTCGTGCA
GAGAGGGGTCCAAGTAGAGACCTCAGACAAATCCGGAAACACAGCTCTGA
AACTGGCCCAACGAAAAGGTCACTTAGATGTAGTTCATCTTTTGGAATCC
CTACCCATTTTAGAGGAAACTAGCGAAGAGGATGAGTCAGTTGATGGCAA
CAACCCCTTTTACTGTGAAATCTGTAAGAGGGACTACAAAGAAACCCCCT
GGCCAATTCATCAAACATCCACAGTGCATCAGTTCAATCTAAAGGCTCTG
CCCGCTCATAAGCTCCACAAATTTAACATATCTGCCAAAAATCGAGGACT
CCAGCTGATGGTGAAACAGGGCTGGGACCAGGAGCACGGATTGGGACCGA
GTCAAAGTGGGCGATTGTATCCCGTCAAGACTGTTCTTCGAAAGCAACGC
ACTGGACTGGGAATTGAACAGCAGTCGGCAAGGGTCTCCCACTTTGGTGC
CTTCGATTTAAACGCTGTTAGGAGAAGGGATCCCATATATCAGCCGAGAA
GGACGCGAAGCGATATGCAGAGGGAAAAGGTGCGCGAATGGAAGCGAGAA
CGGTACCTCCGCAGGGTACTAAGTGCAAGCTTTCTAGACCAT

BO25377.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:06:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8152-RA 1011 CG8152-PA 1..1008 17..1024 5040 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:06:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG8152-RA 1204 CG8152-RA 85..1092 17..1024 5040 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:06:24
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 15310043..15311050 1024..17 5040 100 Minus
Blast to na_te.dros performed on 2014-11-28 03:06:25 has no hits.

BO25377.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:25:40 Download gff for BO25377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 80..1087 17..1026 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:35:22 Download gff for BO25377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 85..1092 17..1026 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:42:58 Download gff for BO25377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8152-RA 85..1092 17..1026 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:42:58 Download gff for BO25377.complete
Subject Subject Range Query Range Percent Splice Strand
2R 15310041..15311050 17..1026 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:35:22 Download gff for BO25377.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 11197546..11198555 17..1026 99   Minus

BO25377.pep Sequence

Translation from 16 to 1042

> BO25377.pep
MNSQNELHPNWLALTTLPLQLKRFVRAGDPDFIAESPKAVKHQIDGLNGA
EAREFYKEVLDAPTTCQPNLPSTHKTAQTRREPERILVPFDKSKFFRLAT
SNKVEELSQMKASEEDLNSRDSFGWTALMMAACEGATEAVSWLVQRGVQV
ETSDKSGNTALKLAQRKGHLDVVHLLESLPILEETSEEDESVDGNNPFYC
EICKRDYKETPWPIHQTSTVHQFNLKALPAHKLHKFNISAKNRGLQLMVK
QGWDQEHGLGPSQSGRLYPVKTVLRKQRTGLGIEQQSARVSHFGAFDLNA
VRRRDPIYQPRRTRSDMQREKVREWKRERYLRRVLSASFLDH

BO25377.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:00:55
Subject Length Description Subject Range Query Range Score Percent Strand
CG8152-PA 336 CG8152-PA 1..336 1..336 1763 100 Plus