BO25386.complete Sequence
899 bp assembled on 2010-06-10
GenBank Submission: KX793847
> BO25386.complete
GAAGTTATCAGTCGGACATGCAAACATTTAAGGTCTGCGCTCTCCTGGCG
TTCTGCTTCGTCCTCGTTTCCGCCCGCGGCAGCAAACGGCGCGATGGCAC
CGTTACGATATCGGAGAGCGAACGAAAGAACATTGAGGACTTTCTGTTGG
CCAAGCTTAAGCAAAATTGCAGGCAGGAAGACGATCGCGCCTGTAAGATG
GTCAAGATGTCTATTGTGATGAACCATCTGTACCTGAACACCCGTATCGA
CCTTGGCGACCGATTCAAGGTCACAGAAAACGGGAATATCTCAATGGTAC
CAGATGATCCGGAGGTCAACCAGCTGCTGTCACGCTCTATGGGGTCCGAT
GAGGAGACCTTCGCCCTTCTGATGGCCAACAAGCTGTGGAAATTCATTCG
TTCGCGCTCCCTGCGATACAAGTTCTCAGAGAACACGGACTTTGTGATCA
ACAGCGATCCGGAGGGCAGTCTGAATTTGGGCGTATCAGTGCGCCCCCTG
GAGGCGTTGCAGGAAGGGCGAGGCAAGATGAAGAACATGGGGCCACTGCT
GATGATGATGGCGGCCAAGACGGGCATGGTGGGAGCGCTTCTGCTCAAAG
GACTCTTCCTGCTGGCCGGCAAGGCTCTAATTGTCTCGAAAATCGCCTTG
CTGCTGGCGGTGATCATCTCACTGAAGAAGCTGCTCTCTAGCAAGAAAAC
CATCGTGGAGGTGCCATCCCACCACGACAGCTATAGCTCCGGGTGGTCGA
GGGCCTTTGACGGGTTCGTGGAGGGACTTGTAGACGTGCCCGCCGATATA
TTGGCCAAGGAGGTGCAGCACCAGCAGGAGCAGGCCCAAAACATGGCTTA
CAGTGGCCAACAGCCGGGGAAAGTGGCGCAAGCAAGCTTTCTAGACCAT
BO25386.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:57:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi3-RB | 867 | CG1150-PB | 1..864 | 18..881 | 4320 | 100 | Plus |
| Osi3-RA | 867 | CG1150-PA | 1..864 | 18..881 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi3-RB | 1381 | CG1150-RB | 233..1103 | 18..888 | 4325 | 99.8 | Plus |
| Osi3-RA | 1129 | CG1150-RA | 233..1103 | 18..888 | 4325 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 6217316..6217921 | 283..888 | 3000 | 99.7 | Plus |
| 3R | 32079331 | 3R | 6216638..6216819 | 103..284 | 895 | 99.5 | Plus |
| 3R | 32079331 | 3R | 6216064..6216153 | 18..107 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:57:04 has no hits.
BO25386.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:23:56 Download gff for
BO25386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi3-RA | 227..1092 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:09 Download gff for
BO25386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi3-RA | 231..1096 | 17..883 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:23 Download gff for
BO25386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Osi3-RA | 231..1096 | 17..883 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:23 Download gff for
BO25386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 6216062..6216153 | 17..107 | 98 | -> | Plus |
| 3R | 6216643..6216818 | 108..283 | 100 | -> | Plus |
| 3R | 6217317..6217914 | 284..883 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:09 Download gff for
BO25386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 2041784..2041875 | 17..107 | 98 | -> | Plus |
| arm_3R | 2042365..2042540 | 108..283 | 100 | -> | Plus |
| arm_3R | 2043039..2043636 | 284..883 | 99 | | Plus |
BO25386.pep Sequence
Translation from 17 to 899
> BO25386.pep
MQTFKVCALLAFCFVLVSARGSKRRDGTVTISESERKNIEDFLLAKLKQN
CRQEDDRACKMVKMSIVMNHLYLNTRIDLGDRFKVTENGNISMVPDDPEV
NQLLSRSMGSDEETFALLMANKLWKFIRSRSLRYKFSENTDFVINSDPEG
SLNLGVSVRPLEALQEGRGKMKNMGPLLMMMAAKTGMVGALLLKGLFLLA
GKALIVSKIALLLAVIISLKKLLSSKKTIVEVPSHHDSYSSGWSRAFDGF
VEGLVDVPADILAKEVQHQQEQAQNMAYSGQQPGKVAQASFLDH
BO25386.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:01:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Osi3-PB | 288 | CG1150-PB | 1..288 | 1..288 | 1446 | 100 | Plus |
| Osi3-PA | 288 | CG1150-PA | 1..288 | 1..288 | 1446 | 100 | Plus |
| Osi7-PA | 288 | CG1153-PA | 36..285 | 40..283 | 224 | 29.3 | Plus |
| Osi12-PA | 295 | CG1154-PA | 107..233 | 99..249 | 175 | 37.5 | Plus |
| Osi8-PA | 274 | CG15591-PA | 12..259 | 9..253 | 158 | 22.6 | Plus |
