BO25396.complete Sequence
886 bp assembled on 2010-06-10
GenBank Submission: KX795873
> BO25396.complete
GAAGTTATCAGTCGACATGTTGCAGCGCGTGTCGCGTAGATTTCCCTCCT
TAAGGCGATGCGGCCTGCGAACGGCATCCACTGTGCCCACAAATCAGGCG
CAGCCGGGCGAGGTAGAGGAGGAGGTCAGTGCGACGGTGAAGAGAATCCG
CTCGGAATTGGCAGCGGATAAGCAGAAACTTAAGTGGCGCACTCCGATTG
GCGACCGGCCGGAGGATTGGAACAGCAAACTGAAGCTGTTCTCCAATGCG
GAGCAAACCTCAGACTTCATCGTGATGATGCAGAAGCCCATCGATCTAAG
TCCGCGGAACATTCGACAGTGGTGGGAGAACCGGGAGGAGCGTATTGAGC
GGCACATGCAGCAGTTTGTCCCGGAAAGGCACAAGATTCTGGGCGCCGAA
TTGGCTGCGGCGCATTTCATACTGTACCGCGGCGGGGCCGTCAAGTTCAT
CAACGATACCCACTGGCGCCGGGCCTCCAAAGATGGCGAGTTCAAACTGC
CTAATAAGTTTGATCCTCGCTATAAAGTGGAGGCCTTGAGGTGTGATAAC
ATGGAACTTTACTACGAGGGGCTGGAGAACCTGCGCTGCCTGGACTCCCT
TAAGTTCCTGTCCTTTCACAATGTGAAAAGCTTTGATGACTGGTGTCTGG
ATAGGATTTCGGGAGGTGGCTTCCCTAACCTGGAAGTGCTCGACCTCTCG
TGCACTCAAATCACCAGCAATGGATTGGCCTGTCTGTATCGTTTTCCTAA
ACTTAAATTACTGATTTTGAATGATCCAAAGGAGACCCTAGAACTGGAAT
TGTCCACGGTCATGTTAGAGGAGGCCATGCCCGCTTTAAAAATTGTTGGC
GCCGACGCTATTCACAGCGCAAGCTTTCTAGACCAT
BO25396.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:57:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4042-RB | 855 | CG4042-PB | 1..852 | 17..868 | 4260 | 100 | Plus |
| CG4042-RA | 855 | CG4042-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:57:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4042-RB | 990 | CG4042-RB | 76..927 | 17..868 | 4260 | 100 | Plus |
| CG4042-RA | 951 | CG4042-RA | 37..888 | 17..868 | 4260 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 20770206..20771057 | 868..17 | 4260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:57:39 has no hits.
BO25396.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:06 Download gff for
BO25396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 72..918 | 22..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:31:23 Download gff for
BO25396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 42..888 | 22..870 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:39:35 Download gff for
BO25396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4042-RA | 42..888 | 22..870 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:39:35 Download gff for
BO25396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 20770204..20771052 | 22..870 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:31:23 Download gff for
BO25396.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 20763304..20764152 | 22..870 | 99 | | Minus |
BO25396.pep Sequence
Translation from 16 to 886
> BO25396.pep
MLQRVSRRFPSLRRCGLRTASTVPTNQAQPGEVEEEVSATVKRIRSELAA
DKQKLKWRTPIGDRPEDWNSKLKLFSNAEQTSDFIVMMQKPIDLSPRNIR
QWWENREERIERHMQQFVPERHKILGAELAAAHFILYRGGAVKFINDTHW
RRASKDGEFKLPNKFDPRYKVEALRCDNMELYYEGLENLRCLDSLKFLSF
HNVKSFDDWCLDRISGGGFPNLEVLDLSCTQITSNGLACLYRFPKLKLLI
LNDPKETLELELSTVMLEEAMPALKIVGADAIHSASFLDH
BO25396.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 03:03:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4042-PB | 284 | CG4042-PB | 1..284 | 1..284 | 1494 | 100 | Plus |
| CG4042-PA | 284 | CG4042-PA | 1..284 | 1..284 | 1494 | 100 | Plus |
