BO25419.complete Sequence
643 bp assembled on 2010-06-10
GenBank Submission: KX796801
> BO25419.complete
GAAGTTATCAGTCGACATGGATCTGCCAATTGGAAAGTTAAACGGACTGC
TAAAGATGCAAATATTCCTCCTGCAATTGTTGCTTTTCGTTTCGCCGGCA
TTGTTGCAGCAGCCACATGTCTTTTACCATCCAAGACAATTGTATTACGA
TTCACCGCGTCTTCGTCGCTTTGAGTATGGTGCCGCTGCCACGCCCATTG
TGGGCGGCTATAGTCCGGCTCCTCCGCCGGCGATTCACTTTCAGCAGCAG
ACGCCACACTTTCAGCTGATTAACTATCGGCCGAGTTATCAGCCCTTGGG
CTTGGATTACCAGCAGCAGCAGTTGCCCGCTCCTGCCGCACCCCCTCCGC
CCCTGTATCCGCAGCAGAGTGTCCAGTACCAGCAGCGGACCATCGCTCCA
CACGCCGATTTGGCCAAATATCGATATGAAGATTGCAGGAGCAGCAGCAG
CAGCAACCCTCACAGAATGTCCAAACGGAAAGACCCAGGAGGTACGCCAA
GGATCTGGACACGGATGTGGCCGAAACCAGAAGTCCAGCTGACCGAAGTG
CCAAGGAAACCAAGTACTTTCATGACATTTTCATGCGCTTTGATGCACCC
GATTCGCGGAGTCATGGCCACGTCCGCAAGCTTTCTAGACCAT
BO25419.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:03:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13305-RC | 612 | CG13305-PC | 1..609 | 17..625 | 3045 | 100 | Plus |
CG13305-RB | 972 | CG13305-PB | 1..415 | 17..431 | 2075 | 100 | Plus |
CG13305-RB | 972 | CG13305-PB | 640..835 | 430..625 | 980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:03:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13305-RC | 1138 | CG13305-RC | 293..901 | 17..625 | 3045 | 100 | Plus |
CG13305-RB | 1364 | CG13305-RB | 293..707 | 17..431 | 2075 | 100 | Plus |
CG13305-RB | 1364 | CG13305-RB | 932..1127 | 430..625 | 980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:03:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 8646116..8646530 | 431..17 | 2075 | 100 | Minus |
3L | 28110227 | 3L | 8645749..8645891 | 572..430 | 715 | 100 | Minus |
3L | 28110227 | 3L | 8645236..8645288 | 625..573 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 03:03:36 has no hits.
BO25419.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:56 Download gff for
BO25419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13305-RC | 289..897 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:34:05 Download gff for
BO25419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13305-RC | 293..901 | 17..627 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:42 Download gff for
BO25419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG13305-RC | 293..901 | 17..627 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:42 Download gff for
BO25419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 8645233..8645288 | 573..627 | 96 | <- | Minus |
3L | 8645749..8645889 | 432..572 | 100 | <- | Minus |
3L | 8646116..8646530 | 17..431 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:34:05 Download gff for
BO25419.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 8638333..8638388 | 573..627 | 96 | <- | Minus |
arm_3L | 8638849..8638989 | 432..572 | 100 | <- | Minus |
arm_3L | 8639216..8639630 | 17..431 | 100 | | Minus |
BO25419.pep Sequence
Translation from 16 to 643
> BO25419.pep
MDLPIGKLNGLLKMQIFLLQLLLFVSPALLQQPHVFYHPRQLYYDSPRLR
RFEYGAAATPIVGGYSPAPPPAIHFQQQTPHFQLINYRPSYQPLGLDYQQ
QQLPAPAAPPPPLYPQQSVQYQQRTIAPHADLAKYRYEDCRSSSSSNPHR
MSKRKDPGGTPRIWTRMWPKPEVQLTEVPRKPSTFMTFSCALMHPIRGVM
ATSASFLDH
BO25419.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:59:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG13305-PC | 203 | CG13305-PC | 1..203 | 1..203 | 1100 | 100 | Plus |
CG13305-PB | 323 | CG13305-PB | 1..138 | 1..138 | 743 | 100 | Plus |