Clone BO25455 Report

Search the DGRC for BO25455

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:254
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG4593-RA
Protein status:BO25455.pep: Imported from assembly
Sequenced Size:661

Clone Sequence Records

BO25455.complete Sequence

661 bp assembled on 2010-06-10

GenBank Submission: KX793893

> BO25455.complete
GAAGTTATCAGTCGACATGGTGTTCTACTTCAAGAGCAATGTGGTCCAGC
CGCCGGCGATGCTATACATGGGTCGCGACAAGCACGAAAACGAGGAGCTC
ATCAGATGGGGCTGGCCGGAGGACGTGTGGTTCCATGTCCACGACCTGTC
CTCGGCCCACGTGTATTTGCGGCTACGGAAGGGCCAGACAATCGACGACA
TACCCACCGATGTGCTGGTGGACGCCGCTCAGTTGTGCAAGGCGAACAGC
ATTCAGGGCAACAAGGTGAACAACCTGGAGGTGGTGTACACCATGTGGGA
GAATCTGAAGAAGACCCCGGACATGGAGCCCGGCCAGGTGGCCTACCACA
ACGAGAAGGCGGTGCGTCGCATTCGCCTGGAGAAGCGCATCAATGAGATT
GTCAATCGCCTGAACAGGACCAAAACGGAGGAGGAGCATCCCGATTTTCG
GGGATTGCGCGAGGCGCGGGATGCCGCTGAGCGGCAAGATCAGAAGAAGA
TCCAGCGCGAGCGTCGCGAGCAGGAGAAGGAGGCTGCCAAGCAGCGTGAG
CTGGAGGCGGAGCTGCGCAGCTATGCGTCCCTCCAGAAATCGGAGAACAT
GCGCACCAACTACGATGCCGGCAACGAGTCGGATGACTTCATGGCAAGCT
TTCTAGACCAT

BO25455.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 03:01:57
Subject Length Description Subject Range Query Range Score Percent Strand
CG4593-RB 630 CG4593-PB 1..627 17..643 3135 100 Plus
CG4593-RA 630 CG4593-PA 1..627 17..643 3135 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:01:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG4593-RB 889 CG4593-RB 91..717 17..643 3135 100 Plus
CG4593-RA 1123 CG4593-RA 91..717 17..643 3135 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 03:01:54
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 7013977..7014603 17..643 3135 100 Plus
Blast to na_te.dros performed on 2014-11-28 03:01:55 has no hits.

BO25455.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-10 21:24:40 Download gff for BO25455.complete
Subject Subject Range Query Range Percent Splice Strand
CG4593-RA 75..701 17..645 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:33:25 Download gff for BO25455.complete
Subject Subject Range Query Range Percent Splice Strand
CG4593-RA 91..717 17..645 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:41:07 Download gff for BO25455.complete
Subject Subject Range Query Range Percent Splice Strand
CG4593-RA 91..717 17..645 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:41:07 Download gff for BO25455.complete
Subject Subject Range Query Range Percent Splice Strand
X 7013977..7014603 17..645 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:33:25 Download gff for BO25455.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6908010..6908636 17..645 99   Plus

BO25455.pep Sequence

Translation from 16 to 661

> BO25455.pep
MVFYFKSNVVQPPAMLYMGRDKHENEELIRWGWPEDVWFHVHDLSSAHVY
LRLRKGQTIDDIPTDVLVDAAQLCKANSIQGNKVNNLEVVYTMWENLKKT
PDMEPGQVAYHNEKAVRRIRLEKRINEIVNRLNRTKTEEEHPDFRGLREA
RDAAERQDQKKIQRERREQEKEAAKQRELEAELRSYASLQKSENMRTNYD
AGNESDDFMASFLDH

BO25455.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 04:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG4593-PB 209 CG4593-PB 1..209 1..209 1099 100 Plus
CG4593-PA 209 CG4593-PA 1..209 1..209 1099 100 Plus