BO25489.complete Sequence
1009 bp assembled on 2010-06-16
GenBank Submission: KX795915
> BO25489.complete
GAAGTTATCAGTCGACATGGACAACGCAAGCTCAACTTTTGGCCAGTCGG
ACTTCGACTGGGACGCCATCAACGTGGGTGACTACCAGTTGGATCACTCC
CAGAACTTTTTCGCACGGGCCAACAAGGAGAACAACAGGAGCCTCAGCAA
TGTTAACCCCCTCCTGCTGTGCACCACTCCGCAGAAGATCGGCCGGGAAC
AGCGCGATGGTGACTTCGATGGCAAGCTGATTAGTGCTGGGGATCTCAAG
AAGGAGTCCCCCAAAGACACGACAGAGGCGTCCAAGGATGCACTCACTAT
CAAGCCCAAAGTTGAGCCCCACGATGTGCCAGAACTCAAGTTGAAAACAG
AGCTCCAGGAGCTGGCTCAAGTGTCCCCACTTGACAACGGCCCAGAGCCG
CAGGACGACATCAAACAAATTGTTCCGCTCAACTGGGGCAAGGATGGGGA
CGATGATGAGAAGCACATGACGGAGGCCGATCAGCACTTGGTCCACCAGG
AACGTCCTCCCGGCGTCGGGGCCAAGCTCCGCCTGGAGTGGTCACCCCCA
CGCCACCGCGAGCACGAGGGAGCCGGCGCCTCTGCCACATCCGCCGCCCC
CAAGGCATACCAGTTCAAGGACGTGTACGAGAGCAAGCGGCAGCAGGCGA
TGCGCAAGCGCTCCGAGGAGGAAAGCAAGGCGCGCCAGTTCCACAGCCGA
CCCATGCCCAACTTTAAGGCCATGCACAAGCGCATGAACGAGCTGGCAGT
CATCCACAAAATCACCGTCCCGCGCACGCCCGAGACGCTCAAGCACAGCC
AGTCGAACGTGGAGCGGCGTCGCGACGACGATCCGGCCGACCAGGCGCGA
CTGCATCCGGCTGGTACCCGCTCCAGACCCTTCCACCTGCGCAGCGAGCA
GCGCGTGCGCGACCGACGCGAGTTCGACGCCGCCGTGCAGGTCAGCCTGG
AGCAGAAGAAGAAGGAGGTAAAGACTAAATCTAGTAGCCCTGCAAGCTTT
CTAGACCAT
BO25489.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:44:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-RA | 978 | CG14781-PA | 1..975 | 17..991 | 4875 | 100 | Plus |
| mei-38-RB | 981 | CG14781-PB | 1..978 | 17..991 | 4810 | 99.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:44:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-RA | 1333 | CG14781-RA | 129..1104 | 16..991 | 4880 | 100 | Plus |
| mei-38-RB | 1336 | CG14781-RB | 129..1107 | 16..991 | 4815 | 99.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:44:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1477375..1478253 | 113..991 | 4395 | 100 | Plus |
| X | 23542271 | X | 1477191..1477288 | 16..113 | 490 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:44:24 has no hits.
BO25489.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-16 15:01:52 Download gff for
BO25489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ssp1-RA | 99..1073 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:27:19 Download gff for
BO25489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 130..1104 | 17..993 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:23:59 Download gff for
BO25489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mei-38-RA | 130..1104 | 17..993 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:23:59 Download gff for
BO25489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1477192..1477288 | 17..113 | 100 | -> | Plus |
| X | 1477376..1478253 | 114..993 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:27:19 Download gff for
BO25489.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 1371225..1371321 | 17..113 | 100 | -> | Plus |
| arm_X | 1371409..1372286 | 114..993 | 99 | | Plus |
BO25489.pep Sequence
Translation from 16 to 1009
> BO25489.pep
MDNASSTFGQSDFDWDAINVGDYQLDHSQNFFARANKENNRSLSNVNPLL
LCTTPQKIGREQRDGDFDGKLISAGDLKKESPKDTTEASKDALTIKPKVE
PHDVPELKLKTELQELAQVSPLDNGPEPQDDIKQIVPLNWGKDGDDDEKH
MTEADQHLVHQERPPGVGAKLRLEWSPPRHREHEGAGASATSAAPKAYQF
KDVYESKRQQAMRKRSEEESKARQFHSRPMPNFKAMHKRMNELAVIHKIT
VPRTPETLKHSQSNVERRRDDDPADQARLHPAGTRSRPFHLRSEQRVRDR
REFDAAVQVSLEQKKKEVKTKSSSPASFLDH
BO25489.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:00:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mei-38-PA | 325 | CG14781-PA | 1..325 | 1..325 | 1707 | 100 | Plus |
| mei-38-PB | 326 | CG14781-PB | 1..326 | 1..325 | 1695 | 99.7 | Plus |
| CG15395-PB | 275 | CG15395-PB | 82..243 | 193..319 | 240 | 33.3 | Plus |
