BO25506.complete Sequence
1045 bp assembled on 2010-06-28
GenBank Submission: KX799240
> BO25506.complete
GAAGTTATCAGTCGACATGTCCTTTAGCGAATCAAATGTTCATCAGTGGG
CTTTATGTGCCCTTGCGGGAGTAACCGGGTTTGTGTGTGGAGCCTTTGTC
CAACAAGAGGCGTCCATAAGGCAGCTGCTCCAGCAGATTCGAAGGGATCC
CTATGTCTACCATCATCGTCACAAGTTATATCCGATGTTATCCACCTTTG
GGACAGACCATGAGGCCCGTTTGTGGAATCGTCCTACTTCATGGGCCGAC
AAATTCAGGGAGCTGGTATTATCACCGATCCTCGATTTAGTTAGTGCTAC
TGTGACGCTGAAATGGGATTCGGCAACCACAACTGATCTGCTCGACCTAG
TCAAGTATGGACTGCCCAGCACGGAGAACTTGTACGTCCATAAGGACTAC
GTGGTTTCGCAGGACCTGCGCACGAACGGCGTCAGATGGATTTGTGAGCA
TTTCCGTGGGGATTATCAAAGGGTATCGTCGGATGGAGGCGGATATAGCA
CCATGAATCTTCGCTACAATGATGTGTATGTGCTGAGCTGCGGTTCGATG
AGCATATGCAAGGCGTTCAAGCGGAAAATCTGGAACGATCTGGAGAACTA
CGTGTCCAGCATGGCCAAGGAGTTTGGCTCAGTGTACGCCTACACTGGGC
CGATATACACCCCAACATGTTACGAGATTGGCAAATGGACCATGAAGTAT
GAGGTGTTTGACTGGATTCCGATACCAGTGCCATCCCATTTCTTTAAGGT
ATTAATCGTGGAGAGTGGAGTTCCGGGATCCCAACCCTTCATGGAAGCAT
TTATCATCGAAAACAGCCGAAGGGTTGGCGGCAAGTTGAATGACCACCGC
GTCAAAGTAGGCGAAATAGAGCGTTACACAGGACTGCGATTTAACAAGAT
CATGCAACCCGTAGTCCAATTCGGGAAGGACTCATTTACGGTGGACACCA
GGGCTTGGGCCGGCAGGTTGGAGGAAATTTCTGAGCCTTTGGTAACATTT
CCTCCCGACCAGAAATTAAATTTAATAGCAAGCTTTCTAGACCAT
BO25506.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:54:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl3-RA | 1014 | CG31679-PA | 1..1011 | 17..1027 | 5055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:54:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl3-RA | 1114 | CG31679-RA | 45..1055 | 17..1027 | 5055 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:54:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 2237135..2237975 | 1027..187 | 4205 | 100 | Minus |
| 2L | 23513712 | 2L | 2238037..2238207 | 187..17 | 855 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:54:18 has no hits.
BO25506.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:56 Download gff for
BO25506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31679-RA | 39..1049 | 17..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:17 Download gff for
BO25506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl3-RA | 45..1055 | 17..1029 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:12 Download gff for
BO25506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tengl3-RA | 45..1055 | 17..1029 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:12 Download gff for
BO25506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 2238037..2238207 | 17..187 | 100 | | Minus |
| 2L | 2237133..2237974 | 188..1029 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:17 Download gff for
BO25506.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 2238037..2238207 | 17..187 | 100 | | Minus |
| arm_2L | 2237133..2237974 | 188..1029 | 99 | <- | Minus |
BO25506.pep Sequence
Translation from 16 to 1045
> BO25506.pep
MSFSESNVHQWALCALAGVTGFVCGAFVQQEASIRQLLQQIRRDPYVYHH
RHKLYPMLSTFGTDHEARLWNRPTSWADKFRELVLSPILDLVSATVTLKW
DSATTTDLLDLVKYGLPSTENLYVHKDYVVSQDLRTNGVRWICEHFRGDY
QRVSSDGGGYSTMNLRYNDVYVLSCGSMSICKAFKRKIWNDLENYVSSMA
KEFGSVYAYTGPIYTPTCYEIGKWTMKYEVFDWIPIPVPSHFFKVLIVES
GVPGSQPFMEAFIIENSRRVGGKLNDHRVKVGEIERYTGLRFNKIMQPVV
QFGKDSFTVDTRAWAGRLEEISEPLVTFPPDQKLNLIASFLDH
BO25506.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tengl3-PA | 337 | CG31679-PA | 1..337 | 1..337 | 1809 | 100 | Plus |
| Tengl2-PA | 318 | CG32463-PA | 4..306 | 10..305 | 323 | 26.5 | Plus |
| Tengl4-PA | 378 | CG4683-PA | 8..355 | 12..292 | 316 | 26.4 | Plus |
| Tengl1-PA | 319 | CG31682-PA | 19..294 | 22..325 | 270 | 27.3 | Plus |
| EndoG-PA | 310 | CG8862-PA | 67..293 | 102..292 | 218 | 28.4 | Plus |
