BO25509.complete Sequence
1174 bp assembled on 2010-06-28
GenBank Submission: KX796452
> BO25509.complete
GAAGTTATCAGTCGACATGTTTATTTGGCATTACTTGACCCTCTTGTGCC
TTGGGTTCGCCCTCATCGATGCGAAATCCATCAAGAAGTCGCAGGCCAAT
CTGTTGGAGCCAACTCTTGATCCTGATGAGAAGCTAGGGAAGATTGGGAA
GTCCCCACCCGACATTTCCAATGATGTGCAACGTGTGCAGGTTCCATTAG
GTGCGACGCCCGGCAAGAATGGCTGGCAGGGCAAGTGGTTTCCCCATGCC
CCTGGACAACAGCAGGAAGCGATTGAATTAAAAATGAAGAGCACCACGGA
GGAAGTTCCTCCGCTGGAGTTCACAACCAAGGATGGCTGGCAGGGCAAGT
GGTTTCCACAAGCTCCCGGAGAGCCGCACTTGGTGAAGAAAAAACCGCTG
GTCGATAACAAAACCAAGTCGGGGAAGTCCACCACACAGGATACTTGGCA
GGGTAAATTGTTTCCGCAGGGTCCCAATGAATCGCACAAGACTAAACAAA
GCAGCTGTGATGATGGCAAGAGCAATCTTGCCGTGGACTTCGATCCAAAC
GACATCCGTGACAGCCTGAATTTCCTATGCATCAGTAGTAATCACAGCTT
GTACCAACCGGATTTGTCCAGAGAAGCCATTCTTACGGAGCACTTTCTAC
CTAGCGCCTATCTGCCGCCTGCCAAGTGCCTTAATGAGTCCATTAGCTAC
TCCCATCTGCCTGCCACCAATGGCCCCTATCGCCCGATGCCCGCTGAATA
TGGCACCTATTCCTACTTGCCTCCTCAGCGATACGTGCGTAATCTGGCGG
AAGGTGCCATCGTAATGCTCTACCATCCCTGCGCTTTTCCCGGCCAAGTG
AAGCAGCTGCAAGACATCGTGGGTGGCTGTCTGTATCGCCATCTGGTGTC
ACCCTCGCTGGCTCTGAGTCCGCAGCGACCGCTGGCCCTGCTCGCCTGGA
GTCGCAGCCTCGAGATGTCCGTCGTGGATCGACAACTGGCGGCGGACTTC
ATCCAGAAACACGCCAAGCAAGGACCACTTGCACCGGAGGAATTGTCGCG
TTTGATTGTCAAGAGACAGACCTACAAGGAGGGCCTTCTTAGGGAAGCGC
ACTTGGTCAACACGGCGGACGACTACGAGCTGTGCGGCTACCTACAGGAG
GATATGGCAAGCTTTCTAGACCAT
BO25509.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:54:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-RA | 1143 | CG12093-PA | 1..1140 | 17..1156 | 5700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:54:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-RA | 1296 | CG12093-RA | 106..1245 | 17..1156 | 5700 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:54:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 2773399..2773902 | 520..17 | 2520 | 100 | Minus |
| 3L | 28110227 | 3L | 2772611..2773046 | 1156..721 | 2180 | 100 | Minus |
| 3L | 28110227 | 3L | 2773105..2773306 | 720..519 | 1010 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:54:08 has no hits.
BO25509.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:53 Download gff for
BO25509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 106..1239 | 23..1158 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:11 Download gff for
BO25509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 112..1245 | 23..1158 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:09 Download gff for
BO25509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12093-RA | 112..1245 | 23..1158 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:09 Download gff for
BO25509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 2772609..2773046 | 721..1158 | 99 | <- | Minus |
| 3L | 2773105..2773304 | 521..720 | 100 | <- | Minus |
| 3L | 2773399..2773896 | 23..520 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:11 Download gff for
BO25509.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 2772609..2773046 | 721..1158 | 99 | <- | Minus |
| arm_3L | 2773105..2773304 | 521..720 | 100 | <- | Minus |
| arm_3L | 2773399..2773896 | 23..520 | 100 | | Minus |
BO25509.pep Sequence
Translation from 16 to 1174
> BO25509.pep
MFIWHYLTLLCLGFALIDAKSIKKSQANLLEPTLDPDEKLGKIGKSPPDI
SNDVQRVQVPLGATPGKNGWQGKWFPHAPGQQQEAIELKMKSTTEEVPPL
EFTTKDGWQGKWFPQAPGEPHLVKKKPLVDNKTKSGKSTTQDTWQGKLFP
QGPNESHKTKQSSCDDGKSNLAVDFDPNDIRDSLNFLCISSNHSLYQPDL
SREAILTEHFLPSAYLPPAKCLNESISYSHLPATNGPYRPMPAEYGTYSY
LPPQRYVRNLAEGAIVMLYHPCAFPGQVKQLQDIVGGCLYRHLVSPSLAL
SPQRPLALLAWSRSLEMSVVDRQLAADFIQKHAKQGPLAPEELSRLIVKR
QTYKEGLLREAHLVNTADDYELCGYLQEDMASFLDH
BO25509.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:09:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12093-PA | 380 | CG12093-PA | 1..380 | 1..380 | 2039 | 100 | Plus |
