Clone BO25514 Report

Search the DGRC for BO25514

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:14
Vector:pDNR-Dual
Associated Gene/TranscriptCG40053-RA
Protein status:BO25514.pep: Imported from assembly
Sequenced Size:259

Clone Sequence Records

BO25514.complete Sequence

259 bp assembled on 2010-06-28

GenBank Submission: KX796097

> BO25514.complete
GAAGTTATCAGTCGACATGGCAGGGATCAAAGCAGTGGTCGCCAACATCA
GGAGCAAGGAAGACACCATAAAGCTGTTATTGAGGAAAACGAAACACGAC
AGTCGGCATCAAACCAGTGGCGAAAATTGTGATGAGGGTGTGCGATATCA
GCGGTCGATCGATAGGAAATGGATTTTCAACACGCGGTCACAATGTGGGG
AGCAATCGGCAAAACATGGGAACACCTATATGAACAGGAAGGCAAGCTTT
CTAGACCAT

BO25514.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed on 2014-11-28 08:53:52 has no hits.
Blast to dmel-all-transcript-r6.02.fasta performed on 2014-11-28 08:53:54 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:50
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 24010385..24010609 241..17 1125 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:53:51 has no hits.

BO25514.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:50 Download gff for BO25514.complete
Subject Subject Range Query Range Percent Splice Strand
CG40053-RA 683..907 17..243 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:04 Download gff for BO25514.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24010381..24010609 17..243 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:04 Download gff for BO25514.complete
Subject Subject Range Query Range Percent Splice Strand
3L 24010381..24010609 17..243 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:05 Download gff for BO25514.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003481..24003709 17..243 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:05 Download gff for BO25514.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 24003481..24003709 17..243 99   Minus

BO25514.pep Sequence

Translation from 16 to 259

> BO25514.pep
MAGIKAVVANIRSKEDTIKLLLRKTKHDSRHQTSGENCDEGVRYQRSIDR
KWIFNTRSQCGEQSAKHGNTYMNRKASFLDH
Sequence BO25514.pep has no blast hits.