BO25515.complete Sequence
493 bp assembled on 2010-06-28
> BO25515.complete
GAAGTTATCAGTCGACATGCTTTTAATAAGGAGTCTAGTAATTGTGTTTT
TAGTAGCGATAAGCGAGTTCGATCGAAACTTTGCCATAAACCATGACAAT
GCTGGAATAGTTCTAAGGGAAATAAACAAGAGAAGAGATCGCCATGGAGT
CCCAAAATTGACATTGGACAACGTGCTCAGTAAGGGATGCCAAAGTTATG
CTTGGAAACTGTCCAAGTCGGCGACTCTTAACTATTCGGACCCCACTAAC
AAGGATTACACAGAAAGCATCTGCAGATTTGAAGTAAAGAGGGGAGCACT
GTCGAGATGTGTCAAGAACTGGTATAATGGAAGGAAGTTCGATATTTTAG
ACCCCAAGGCTAAAGATTTTACTGCCATGATTTGGAGGTCGTCCGTTTCC
TTGGGATATGGCGACGCTAACATAAATTTTTCTTCGTTGGCACATCGTAG
GCACCGAACGCTCGGACATGTTCCCGCAAGCTTTCTAGACCAT
BO25515.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31286-RB | 618 | CG31286-PB | 1..411 | 17..427 | 2055 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31286-RB | 1834 | CG31286-RB | 91..501 | 17..427 | 2055 | 100 | Plus |
CG31286-RB | 1834 | CG31286-RB | 898..950 | 423..475 | 250 | 98.1 | Plus |
CG1315-RB | 1456 | CG1315-RB | 1256..1304 | 475..427 | 245 | 100 | Minus |
CG1315-RA | 1409 | CG1315-RA | 1256..1304 | 475..427 | 245 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 6641621..6641842 | 205..426 | 1110 | 100 | Plus |
3R | 32079331 | 3R | 6641426..6641565 | 66..205 | 700 | 100 | Plus |
3R | 32079331 | 3R | 6641322..6641372 | 17..67 | 255 | 100 | Plus |
3R | 32079331 | 3R | 6642414..6642462 | 427..475 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:53:46 has no hits.
BO25515.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:49 Download gff for
BO25515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RC | 91..549 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:03 Download gff for
BO25515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RB | 91..501 | 17..426 | 99 | -> | Plus |
CG31286-RB | 902..950 | 427..477 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:02 Download gff for
BO25515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31286-RB | 91..501 | 17..426 | 99 | -> | Plus |
CG31286-RB | 902..950 | 427..477 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:02 Download gff for
BO25515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 6641322..6641372 | 17..67 | 100 | -> | Plus |
3R | 6641428..6641565 | 68..205 | 100 | -> | Plus |
3R | 6641622..6641842 | 206..426 | 100 | -> | Plus |
3R | 6642414..6642462 | 427..477 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:03 Download gff for
BO25515.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 2467044..2467094 | 17..67 | 100 | -> | Plus |
arm_3R | 2467150..2467287 | 68..205 | 100 | -> | Plus |
arm_3R | 2467344..2467564 | 206..426 | 100 | -> | Plus |
arm_3R | 2468136..2468184 | 427..477 | 96 | | Plus |
BO25515.pep Sequence
Translation from 16 to 493
> BO25515.pep
MLLIRSLVIVFLVAISEFDRNFAINHDNAGIVLREINKRRDRHGVPKLTL
DNVLSKGCQSYAWKLSKSATLNYSDPTNKDYTESICRFEVKRGALSRCVK
NWYNGRKFDILDPKAKDFTAMIWRSSVSLGYGDANINFSSLAHRRHRTLG
HVPASFLDH
BO25515.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31286-PB | 205 | CG31286-PB | 1..137 | 1..137 | 718 | 100 | Plus |
CG31482-PA | 195 | CG31482-PA | 1..130 | 1..134 | 174 | 29.5 | Plus |
CG32313-PB | 182 | CG32313-PB | 5..153 | 8..152 | 141 | 30.3 | Plus |
CG32313-PA | 181 | CG32313-PA | 5..152 | 8..152 | 140 | 31 | Plus |