Clone BO25515 Report

Search the DGRC for BO25515

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:255
Well:15
Vector:pDNR-Dual
Associated Gene/Transcript
Protein status:BO25515.pep: Imported from assembly
Sequenced Size:493

Clone Sequence Records

BO25515.complete Sequence

493 bp assembled on 2010-06-28

> BO25515.complete
GAAGTTATCAGTCGACATGCTTTTAATAAGGAGTCTAGTAATTGTGTTTT
TAGTAGCGATAAGCGAGTTCGATCGAAACTTTGCCATAAACCATGACAAT
GCTGGAATAGTTCTAAGGGAAATAAACAAGAGAAGAGATCGCCATGGAGT
CCCAAAATTGACATTGGACAACGTGCTCAGTAAGGGATGCCAAAGTTATG
CTTGGAAACTGTCCAAGTCGGCGACTCTTAACTATTCGGACCCCACTAAC
AAGGATTACACAGAAAGCATCTGCAGATTTGAAGTAAAGAGGGGAGCACT
GTCGAGATGTGTCAAGAACTGGTATAATGGAAGGAAGTTCGATATTTTAG
ACCCCAAGGCTAAAGATTTTACTGCCATGATTTGGAGGTCGTCCGTTTCC
TTGGGATATGGCGACGCTAACATAAATTTTTCTTCGTTGGCACATCGTAG
GCACCGAACGCTCGGACATGTTCCCGCAAGCTTTCTAGACCAT

BO25515.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG31286-RB 618 CG31286-PB 1..411 17..427 2055 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG31286-RB 1834 CG31286-RB 91..501 17..427 2055 100 Plus
CG31286-RB 1834 CG31286-RB 898..950 423..475 250 98.1 Plus
CG1315-RB 1456 CG1315-RB 1256..1304 475..427 245 100 Minus
CG1315-RA 1409 CG1315-RA 1256..1304 475..427 245 100 Minus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:44
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 6641621..6641842 205..426 1110 100 Plus
3R 32079331 3R 6641426..6641565 66..205 700 100 Plus
3R 32079331 3R 6641322..6641372 17..67 255 100 Plus
3R 32079331 3R 6642414..6642462 427..475 245 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:53:46 has no hits.

BO25515.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:49 Download gff for BO25515.complete
Subject Subject Range Query Range Percent Splice Strand
CG31286-RC 91..549 17..477 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:03 Download gff for BO25515.complete
Subject Subject Range Query Range Percent Splice Strand
CG31286-RB 91..501 17..426 99 -> Plus
CG31286-RB 902..950 427..477 96   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:02 Download gff for BO25515.complete
Subject Subject Range Query Range Percent Splice Strand
CG31286-RB 91..501 17..426 99 -> Plus
CG31286-RB 902..950 427..477 96   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:02 Download gff for BO25515.complete
Subject Subject Range Query Range Percent Splice Strand
3R 6641322..6641372 17..67 100 -> Plus
3R 6641428..6641565 68..205 100 -> Plus
3R 6641622..6641842 206..426 100 -> Plus
3R 6642414..6642462 427..477 96   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:03 Download gff for BO25515.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 2467044..2467094 17..67 100 -> Plus
arm_3R 2467150..2467287 68..205 100 -> Plus
arm_3R 2467344..2467564 206..426 100 -> Plus
arm_3R 2468136..2468184 427..477 96   Plus

BO25515.pep Sequence

Translation from 16 to 493

> BO25515.pep
MLLIRSLVIVFLVAISEFDRNFAINHDNAGIVLREINKRRDRHGVPKLTL
DNVLSKGCQSYAWKLSKSATLNYSDPTNKDYTESICRFEVKRGALSRCVK
NWYNGRKFDILDPKAKDFTAMIWRSSVSLGYGDANINFSSLAHRRHRTLG
HVPASFLDH

BO25515.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG31286-PB 205 CG31286-PB 1..137 1..137 718 100 Plus
CG31482-PA 195 CG31482-PA 1..130 1..134 174 29.5 Plus
CG32313-PB 182 CG32313-PB 5..153 8..152 141 30.3 Plus
CG32313-PA 181 CG32313-PA 5..152 8..152 140 31 Plus