BO25519.complete Sequence
1198 bp assembled on 2010-06-28
GenBank Submission: KX795743
> BO25519.complete
GAAGTTATCAGTCGACATGTCGAATACTTCAGTTCGCCCGATTCCAACGT
TAAAGGGCATCTTTTCGGTGCCGCGCGTCACACAGTCCCGAAACTTCCTC
AAGGAAAACAAGGTGAGCCTGCGCTCGCTGGAAAAGTCCACCAGCCAGAA
GTTGGCCGCTAAGGAGCCGACGCGCCCGAAATGGATGCCCCCGCTGCGAC
GCTCTTCCTCCGTGATGGGAGACTCAAAGGCGGAGAAACCAGCAGCTAAG
GGCAAAACTATAAAACAGAACTCGTTGCAAAATGGCCGCAGCACCTCTCG
CTCACAGCACCAACTGGCCGTGGCCGTTCCGGCGGAGGGGGAACGCTTCG
ATGGCCTGGAGGAGCGCAATCCCATCTTATATGACCCGTCGGAGAACTTA
GAATCCGAGAATCTCCAAGAGCCTTCGTCGGATACAGACATTGATCGCTG
TCAATCGTGTGGCACGAATCGGAGCTCCACCAGCATAGCCATCCAAACTG
AGGACATTACCGACGAACTCTATCTAACAAATGCTCTGAAGAAATGTAAC
TTTGATGCCAGATCTATACTGGAGGAATCCGGTGCAAAATACGGGGAAAA
CTACAAACCCATGCAATATGAAAACGAGGAAGATTTGGAACAGTTGCCGC
TTTCGGCGCGTTCGAACTCCTCGAAGCAGAGTCGCTTCAACATGTCCGAA
ATGGAGGCTATGCCCATGACCGAGGCCGAACCTGCAAACTACGGCGCCTC
AGACGACGAGGCTCCACTCAGTGCCCGTAGTCGTTTCACAACGGCCTCCA
ATGTCACCACCATAAGCTCTAAGTCAAAGCGTCGTGAGCATAAACTAGGA
TCCCGAGATGAGGTGCGCTTGCCGCGTTACCTGGAAAAGCAGAAGCGCGA
GAAGGCGGTGGCCAAGCAGCTTGCGGAATCGCTGGATCCCGACTGTCCGC
GTGGCCATGTGTTGCTCAGCGATCAGGACCGACTGACGCACCTCACTAAT
GCTAAGAAACGCTACGAACAGCTGGTTAATGAACTGAACCACATGCCCAT
GACTGCACAGACGTTGAGGGTGCGCAACCGCAAGGCGGAGATCGACAAGG
AGCTGACCACCGTGGAGGAGGACATCCGCATATACTCCAAGGCAAAGGTC
TTCGTGCTGGCCAGCAAGTCGCGACAGTTGGCAAGCTTTCTAGACCAT
BO25519.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:53:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-RC | 1167 | CG11125-PC | 1..1164 | 17..1180 | 5805 | 99.9 | Plus |
| CG11125-RA | 1167 | CG11125-PA | 1..1164 | 17..1180 | 5805 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:53:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-RC | 2177 | CG11125-RC | 180..1345 | 15..1180 | 5815 | 99.9 | Plus |
| CG11125-RA | 1597 | CG11125-RA | 180..1345 | 15..1180 | 5815 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:53:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 7447787..7448265 | 75..553 | 2335 | 99.2 | Plus |
| 2R | 25286936 | 2R | 7448312..7448619 | 544..851 | 1540 | 100 | Plus |
| 2R | 25286936 | 2R | 7448994..7449163 | 1011..1180 | 850 | 100 | Plus |
| 2R | 25286936 | 2R | 7448783..7448942 | 852..1011 | 800 | 100 | Plus |
| 2R | 25286936 | 2R | 7447652..7447712 | 15..75 | 305 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:53:30 has no hits.
BO25519.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-06-28 17:10:45 Download gff for
BO25519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 176..1339 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:30:56 Download gff for
BO25519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 182..1345 | 17..1182 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:26:59 Download gff for
BO25519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11125-RA | 182..1345 | 17..1182 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:26:59 Download gff for
BO25519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 7447654..7447711 | 17..74 | 100 | -> | Plus |
| 2R | 7447787..7448255 | 75..543 | 99 | -> | Plus |
| 2R | 7448312..7448619 | 544..851 | 100 | -> | Plus |
| 2R | 7448783..7448941 | 852..1010 | 100 | -> | Plus |
| 2R | 7448994..7449163 | 1011..1182 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:30:56 Download gff for
BO25519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 3335159..3335216 | 17..74 | 100 | -> | Plus |
| arm_2R | 3335292..3335760 | 75..543 | 99 | -> | Plus |
| arm_2R | 3335817..3336124 | 544..851 | 100 | -> | Plus |
| arm_2R | 3336288..3336446 | 852..1010 | 100 | -> | Plus |
| arm_2R | 3336499..3336668 | 1011..1182 | 98 | | Plus |
BO25519.pep Sequence
Translation from 16 to 1198
> BO25519.pep
MSNTSVRPIPTLKGIFSVPRVTQSRNFLKENKVSLRSLEKSTSQKLAAKE
PTRPKWMPPLRRSSSVMGDSKAEKPAAKGKTIKQNSLQNGRSTSRSQHQL
AVAVPAEGERFDGLEERNPILYDPSENLESENLQEPSSDTDIDRCQSCGT
NRSSTSIAIQTEDITDELYLTNALKKCNFDARSILEESGAKYGENYKPMQ
YENEEDLEQLPLSARSNSSKQSRFNMSEMEAMPMTEAEPANYGASDDEAP
LSARSRFTTASNVTTISSKSKRREHKLGSRDEVRLPRYLEKQKREKAVAK
QLAESLDPDCPRGHVLLSDQDRLTHLTNAKKRYEQLVNELNHMPMTAQTL
RVRNRKAEIDKELTTVEEDIRIYSKAKVFVLASKSRQLASFLDH
BO25519.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:08:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11125-PC | 388 | CG11125-PC | 1..388 | 1..388 | 1959 | 100 | Plus |
| CG11125-PA | 388 | CG11125-PA | 1..388 | 1..388 | 1959 | 100 | Plus |
| CG32591-PB | 392 | CG32591-PB | 12..383 | 25..375 | 174 | 23.8 | Plus |
| CG32591-PA | 392 | CG32591-PA | 12..383 | 25..375 | 174 | 23.8 | Plus |
